Organelle enrichment

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CHEBI ID

CHEBI:16668 (5)
CHEBI:15891 (5)
CHEBI:17126 (4)
CHEBI:15354 (4)
CHEBI:16919 (4)
CHEBI:17533 (4)
CHEBI:27897 (4)
CHEBI:16113 (4)
CHEBI:7916 (4)
CHEBI:37024 (4)
CHEBI:6650 (4)
CHEBI:16856 (4)
CHEBI:18237 (4)
CHEBI:22660 (4)
CHEBI:16811 (3)
CHEBI:15355 (3)
CHEBI:17568 (3)
CHEBI:26271 (3)
CHEBI:28044 (3)
CHEBI:16708 (3)
CHEBI:16235 (3)
CHEBI:17562 (3)
CHEBI:15756 (3)
CHEBI:16737 (3)
CHEBI:17750 (3)
CHEBI:17015 (3)
CHEBI:15746 (3)
CHEBI:28867 (3)
CHEBI:17724 (3)
CHEBI:17151 (3)

Metabolite Name

Carnitine (4)
Taurine (3)
Creatine (3)
Adenine (3)
Guanine (3)
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Diethanolamine (2)
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Caffeine (2)
Uracil (2)

First Public Date

2026 (6)
2022 (4)
2024 (3)
2025 (2)
2020 (2)
2014 (2)
2021 (1)
2019 (1)
2018 (1)

Classification

protozoa (1)

Modification

+3amu) (1)

Study type

Transcription profiling by array (35)
RNA-seq of coding RNA (21)
ChIP-seq (10)
Methylation profiling by array (4)
Comparative genomic hybridization by array (3)
RNA-seq of total RNA (3)
ChIP-chip by tiling array (2)
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Other (2)
Unknown experiment type (1)
MNase-seq (1)
Cell line - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (32)
2023 (30)
2020 (28)
2025 (26)
2024 (26)
2021 (22)
2014 (20)
2015 (19)
2013 (17)
2012 (14)
2016 (12)
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2011 (10)
2017 (10)
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2007 (2)
2002 (1)

Lab affiliation

Department of Synthetic Chemistry & Biological Chemistry, Graduate School of Engineering, Kyoto Univ. Katsura, Kyoto 615-8510, JAPAN (3)
Wellcome Trust Centre for Cell Biology (2)
department of chemistry, Boku, Vienna (1)
Beijing Ditan Hospital, Capital Medical University (1)
Group Leader, Quantitative Cell Science, Chan Zuckerberg Biohub San Francisco, Ca, USA (1)
1Research Institute of the McGill University Health Centre, Montreal, QC, Canada 2Department of Pathology, McGill University, Montreal, QC, Canada 3Gerald Bronfman Department of Oncology, McGill University, Montreal, QC, Canada (1)
Univ. Grenoble Alpes, INRA, CNRS, CEA, BIG-LPCV, 38000 Grenoble, France (1)
Department of Structural Biology, Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP) (1)
CAS Key Laboratory of Separation Science for Analytical Chemistry, National Chromatographic R & A Center, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, China. (1)
Saarland University Preclinical Center for Molecular Signalling (PZMS) Institute of Medical Biochemistry and Molecular Biology (1)
Department of Genetics, Stanford School of Medicine, USA (1)
Departamento de Genética Molecular, Instituto de Fisiología Celular, Universidad Nacional Autónoma de México, Apartado Postal 70-243, México 04510, D.F. (Mexico) (1)
Departments of Biology and Chemistry, Vanderbilt University, USA (1)
College of Veterinary Medicine, Gansu Agricultural University (1)
UMR INRA 1347/AgroSup/Université de Bourgogne, Dijon, France (1)
Professor of Cell Biology and Parasitology Division of Biological Chemistry and Drug Discovery School of Life Sciences University of Dundee DUNDEE DD1 5EH UK (1)
Group leader, Cell Biology, Neurobiology and Biophysics, Department of Biology, Faculty of Science, Utrecht University, Utrecht 3584 CH, The Netherlands (1)
Plant Physiology, Departemnt of Organisms and Systems Biology, University of Oviedo, Spain (1)
Novo Nordisk Foundation Center for Protein Research; University of Copenhagen (1)
Institute of Parasitology, University of Zurich, Switzerland (1)
Departamento de Biología Molecular y Biotecnología, Instituto de Investigaciones Biomédicas, Universidad Nacional Autónoma de México, Cd. Universitaria, Coyoacán, Ciudad de México, México (1)
Aging and Muscle Metabolism Lab, Department of Biomedical Sciences & Service of Endocrinology, Diabetes and Metabolism, Faculty of Biology and Medicine, Lausanne University Hospital and University of Lausanne, Bugnon 7, 1005 Lausanne, Switzerland (1)
CAS Key Laboratory of Separation Science for Analytical Chemistry, National Chromatographic R & A Center, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China. (1)
Department of Biochemistry and Pharmacology and The Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, Victoria, 3052, Australia (1)
Biologia Cel·lular Departament de Biomedicina Facultat de Medicina i Ciències de la Salut Universitat de Barcelona Spain (1)
National Institute of Plant Genome Research Aruna Asaf Ali Marg New Delhi - 110 067 (1)
Division of Plant Sciences, University of Dundee at JHI, Scotland, UK (1)
School of Natural Sciences, Macquarie University, Sydney, Australia Biomolecular Discovery Research Centre, Macquarie University, Sydney, Australia Institute for Glyco-core Research (iGCORE), Nagoya University, Nagoya, 464-8601, Japan (1)
Beijing, You An Men Wai Xi Tou Tiao No.10 Capital Medical University, Beijing Laboratory of Oral Health (1)
Emmy-Noether Research Group Cellular Proteomics and Metabolic Signaling Institute for Diabetes and Obesity Helmholtz Diabetes Center - Munich Germany (1)

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IDH1 Mutations Induce Organelle Defects Via Dysregulated Phospholipids (FA_HILICZ)

Infiltrating gliomas are devastating and incurable tumors. Amongst all gliomas, those harboring an isocitrate dehydrogenase 1 mutation (IDHmut), acquire a different tumor biology and clinical manifestation than those that are IDHWT. Understanding the unique metabolic profile reprogrammed by IDH1 ...

2020-11-24 | MTBLS1967 | MetaboLights

IDH1 Mutations Induce Organelle Defects Via Dysregulated Phospholipids (CSHpos)

2020-11-24 | MTBLS1974 | MetaboLights

IDH1 Mutations Induce Organelle Defects Via Dysregulated Phospholipids (CSHNeg)

2020-11-24 | MTBLS1973 | MetaboLights

Tear lipidomics profiling reveals ocular-surface lipid remodeling associated with organelle stress in a mouse model of inflammatory dry eye disease

This study aimed to determine whether dry eye disease (DED) is accompanied by ocular-surface lipid remodeling and whether such changes converge on organelle stress–associated pathways in a mouse model of inflammatory dry eye. Tear samples were collected from mice and analyzed by LC–MS/MS–based non-t...

2026-04-04 | MTBLS14217 | MetaboLights

R7 Soybean seed organelle enrichment proteomics

This data is part of a study examining the results of increased malic enzyme activity in soybean seeds. The study characterizes changes to oil content and free amino acids when malic enzyme is expressed in different subcellular locations. Malic enzyme was expressed using seed-specific promoters to t...

ORGANISM(S): Glycine max

2023-03-22 | PXD039994 | Pride

R7 seed Glycine max Organelle enrichment

Proteomic analysis of Giardia lamblia ESV and PV organelle enriched fractions

The protozoan Giardia lamblia is a unique biological model to investigate minimal cellular mechanisms because it is an early‐diverged eukaryote that has undergone reductive evolution and has minimized or lost organelles such as mitochondria, peroxisomes, the endo-lysosomal system and a Golgi apparat...

ORGANISM(S): Giardia lamblia ATCC 50803

2014-03-11 | PXD000694 | Pride

Flow cytometry assisted organelle sorting Organelle proteomics Giardia Encystation Endocytosis

High-confidence glycosome proteome for procyclic form Trypanosoma brucei by epitope-tag organelle enrichment and SILAC proteomics.

Not available

S-EPMC4052807 | biostudies-literature

Mouse oocytes differentiate through organelle enrichment from sister cyst germ cells.

Not available

S-EPMC6910648 | biostudies-literature

Systematic comparison of strategies for the enrichment of lysosomes by data independent acquisition

We describe a comparison of individual approaches for the enrichment of lysosomes comparing four different strategies using data independent acquisition (DIA). As a benchmark, we chose a crude enrichment strategy, which is the centrifugation of the PNS at 20,000 x g termed organelle enriched pellet ...

ORGANISM(S): Homo sapiens (Human)

2020-01-21 | PXD015098 | Pride

Enrichment methods Lysosomes Data independent acquisition (dia)

A high-confidence glycosome proteome for procyclic form Trypanosoma brucei by epitope-tag organelle enrichment and SILAC

Epitope tagging and magnetic bead enrichment were combined with SILAC quantitative proteomics to determine a high-confidence glycosome proteome for the procyclic life cycle stage of the parasite Trypanosoma brucei.

ORGANISM(S): Trypanosoma brucei

2014-05-13 | PXD000663 | Pride

Trypanosoma brucei Orbitrap velos Ap-ms

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