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MetabolomicsThermal Profiling Maps Multilayered Organization of the Mitochondrial Proteome

Mitochondria execute essential metabolic, biosynthetic, and signaling functions, yet the regulatory principles governing their proteome remain incompletely understood. Here, we develop a thermal proteome profiling (TPP) workflow applied directly to purified mitochondria, enabling systematic analy...

2025-12-08 | MTBLS7386 | MetaboLights
ProteomicsTemporal Proteomics During Neurogenesis Reveals Large-scale Proteome and Organelle Remodeling via Selective Autophagy
Raw mass spectrometry data associated with the following paper: Temporal Proteomics During Neurogenesis Reveals Large-scale Proteome and Organelle Remodeling via Selective Autophagy. DOI:10.1016/j.molcel.2021.10.001 Related to Figure1D: AO3335-AO3345 Related to Figure4B: Day0 (AO3379-3390); Day4 (AO...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2021-08-09 | MSV000087961 | MassIVE
GenomicsGlobal organelle profiling reveals subcellular localization and remodeling at proteome scale
Global organelle profiling reveals subcellular localization and remodeling at proteome scale
PRJNA1165290 | ENA
TranscriptomicsGlobal organelle profiling reveals subcellular localization and remodeling at proteome scale
Defining the subcellular distribution of all human proteins and its remodeling across cellular states remains a central goal in cell biology. Here, we present a high-resolution strategy to map subcellular organization using organelle immuno-capture coupled to mass spectrometry. We apply this workflo...
ORGANISM(S): Homo sapiens Human coronavirus OC43 
2024-10-04 | GSE278059 | GEO
UnknownHigh-confidence glycosome proteome for procyclic form Trypanosoma brucei by epitope-tag organelle enrichment and SILAC proteomics.
Not available
S-EPMC4052807 | biostudies-literature
GenomicsA cooperative organelle biogenesis program in mammalian cells
A cooperative organelle biogenesis program in mammalian cells
PRJNA832250 | ENA
UnknownTemporal proteomics during neurogenesis reveals large-scale proteome and organelle remodeling via selective autophagy.
Not available
S-EPMC8688335 | biostudies-literature
ProteomicsSpatial and temporal proteomic of HCMV-infected cells
Project for the study of spatial and temporal alterations in organelle proteins during HCMV infection. Two datasets are included, one for label-free quantification and one for TMT quantification. Samples were collected at 5 time points of infection (24, 48, 72, 96, and 120 hours) and subject to orga...
ORGANISM(S): Homo sapiens (Human) Human cytomegalovirus (strain AD169) (HHV-5) (Human herpesvirus 5) 
2016-09-27 | PXD003925 | Pride
Hcmv spatial organelle temporal cytomegalovirus fibroblasts 
ProteomicsProteomic analysis of Giardia lamblia ESV and PV organelle enriched fractions
The protozoan Giardia lamblia is a unique biological model to investigate minimal cellular mechanisms because it is an early‐diverged eukaryote that has undergone reductive evolution and has minimized or lost organelles such as mitochondria, peroxisomes, the endo-lysosomal system and a Golgi apparat...
ORGANISM(S): Giardia lamblia ATCC 50803 
2014-03-11 | PXD000694 | Pride
Flow cytometry assisted organelle sorting Organelle proteomics Giardia Encystation Endocytosis 
UnknownMapping the Arabidopsis organelle proteome.
Not available
S-EPMC1458916 | biostudies-literature
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