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OtherProtein methionine sulfoxide dynamics in Arabidopsis thaliana under oxidative stress.
Data from ProteomeXchange, PXD ID: PXD001286. Experiment: TP3_MetCofr, file: folder summary. Published as part of Mol Cell Proteomics. 2015 Feb 18 . From the Abstract: {{i}} ... Methionine oxidation, studied here, is a reversible posttranslational modification, which is emerging as a mechanism by w...
ORGANISM(S): Ath1 
GPM32320014280 | GPMDB
Resource Reanalysis 
MetabolomicsB-cell Translocation Gene 2 Inhibits UFMylation Modification of FMO1 thus Restricting Taurine Synthesis and Exacerbating Ferroptosis in Hepatic Ischemia-Reperfusion Injury

Hepatic ischemia-reperfusion (I/R) injury is a common complication occurs during liver transplantation. However, the mechanisms underlying hepatic I/R injury have not been fully elucidated. B-cell translocation gene 2 (Btg2) has been implicated in the development of various diseases. However, its...

2026-03-07 | MTBLS11677 | MetaboLights
TranscriptomicsTranscription profiling of human monocytes (U937 cell line) to assess the impact of curcumin on monocytes exposed to oxidative stress
Oxidative stress as a result of cigarette smoking is an important etiological factor in the pathogenesis of chronic obstructive pulmonary disease (COPD), a chronic steroid-insensitive inflammatory disease of the airways. The activity of the transcriptional co-repressor Histone deacetylase-2 (HDAC2) ...
ORGANISM(S): Homo sapiens 
2009-12-17 | E-GEOD-10896 | biostudies-arrayexpress
ProteomicsDynamic 23S rRNA modification ho5C2501 benefits Escherichia coli under oxidative stress
Post-transcriptional modifications are added to ribosomal RNAs (rRNAs) to govern ribosome biogenesis and to fine-tune protein biosynthesis. RlhA, a dedicated modification enzyme, adds a unique 5-hydroxycytidine (ho5C) at 23S rRNA position 2501 in E. coli and related bacteria. However, the molecular ...
ORGANISM(S): Escherichia coli 
2022-02-16 | PXD025875 | Pride
E. coli Ribosome Dps Oxidative stress Rlha Rna modifications 
ProteomicsBeyond RNA Modification: A Novel Role for tRNA modifying Enzyme in Oxidative Stress Response
RNA modifications are fundamental to regulating essential cellular processes, including RNA folding, stability, gene expression, and the accuracy and efficiency of decoding. These modifications are added post-transcriptionally by specialized enzymes, yet their broader roles beyond RNA modification r...
ORGANISM(S): Vibrio cholerae O1 biovar El Tor 
2025-12-22 | PXD057145 | Pride
Oxidative stress Vibrio cholerae Rna modification 
ProteomicsBeyond RNA Modification: A Novel Role for tRNA modifying Enzyme in Oxidative Stress Response
RNA modifications are fundamental to regulating essential cellular processes, including RNA folding, stability, gene expression, and the accuracy and efficiency of decoding. These modifications are added post-transcriptionally by specialized enzymes, yet their broader roles beyond RNA modification r...
ORGANISM(S): Vibrio cholerae O1 biovar El Tor 
2025-12-22 | PXD057105 | Pride
Oxidative stress Vibrio cholerae Rna modification 
TranscriptomicsRenal Cell Carcinomas in Vinylidene Chloride Exposed Male B63FC1 Mice Are Characterized by Oxidative Stress and TP53 Overexpression
Vinylidene Chloride has been widely used in the production of plastics and flame retardants. Exposure of B6C3F1 to VDC in the 2-year National Toxicology Program carcinogenicity bioassay resulted in a dose-dependent increase in renal cell hyperplasias, adenomas, and carcinomas (RCCs). Global gene exp...
ORGANISM(S): Mus musculus 
2015-12-21 | E-GEOD-67320 | biostudies-arrayexpress
ProteomicsBeyond RNA Modification: A Novel Role for tRNA modifying Enzyme in Oxidative Stress Response
RNA modifications are fundamental to regulating essential cellular processes, including RNA folding, stability, gene expression, and the accuracy and efficiency of decoding. These modifications are added post-transcriptionally by specialized enzymes, yet their broader roles beyond RNA modification r...
ORGANISM(S): Vibrio cholerae O1 biovar El Tor 
2025-08-25 | PXD057061 | Pride
Rna modification Vibrio cholerae Oxidative stress 
TranscriptomicsDietary heme induces instantaneous oxidative stress but delayed cytotoxicity and compensatory hyperproliferation in mouse colon
Red meat consumption is associated with an increased colon cancer risk. Heme, present in red meat, injures the colon surface epithelium by luminal cytotoxicity and reactive oxygen species. This surface injury is compensated by hyperproliferation and hyperplasia of crypt cells, which was induced by a...
ORGANISM(S): Mus musculus 
2013-05-03 | E-GEOD-40671 | biostudies-arrayexpress
ProteomicsProteomic analysis reveals that Sulfamethoxazole induces oxidative stress in M. tuberculosis
These sixteen RAW files represent twelve different samples submitted to the Centre for Proteomic and Genomic Research in Cape Town, South Africa, for shotgun proteomics analysis. Two different strains of Mycobacterium tuberculosis are included: --K636, a "Beijing" variant susceptible to TB drugs t...
ORGANISM(S): Mycobacterium Tuberculosis (ncbitaxon:1773) 
2018-03-25 | MSV000082209 | MassIVE
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