Pa14 - OmicsDI

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Unknown (398)
Genomics (330)
Transcriptomics (186)
Proteomics (58)
Metabolomics (16)
Other (6)
Models (3)

Organisms

Pseudomonas aeruginosa (91)
Caenorhabditis elegans (45)
Andropogon gerardi (37)
Bacteria (37)
Pseudomonas aeruginosa UCBPP-PA14 (35)
Pseudomonas aeruginosa PA14 (35)
Pseudomonas aeruginosa PAO1 (7)
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Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (1)
Burkholderia thailandensis E264 (1)
Pseudomonas paraeruginosa PA7 (1)
Streptococcus sanguinis SK36 (1)
Escherichia coli BW25113 (1)

Organisms

Pseudomonas aeruginosa (73)
Pseudomonas aeruginosa PA14 (55)
Caenorhabditis elegans (45)
Pseudomonas aeruginosa UCBPP-PA14 (43)
Mus musculus (5)
Danio rerio (2)
Arabidopsis thaliana (2)
Homo sapiens (2)
Escherichia coli PA14 (1)
Pseudomonas phage ZC08 (1)
Pseudomonas phage ZC03 (1)
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Saccharomyces pastorianus (1)
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Disease

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CHEBI ID

CHEBI:170071 (1)
CHEBI:170070 (1)
CHEBI:170061 (1)
CHEBI:172382 (1)
CHEBI:172381 (1)
CHEBI:170058 (1)
CHEBI:170054 (1)
CHEBI:170051 (1)
CHEBI:170047 (1)
CHEBI:170046 (1)
CHEBI:170043 (1)
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CHEBI:170039 (1)
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CHEBI:170024 (1)
CHEBI:170020 (1)
CHEBI:170018 (1)
CHEBI:170044 (1)
CHEBI:170022 (1)
CHEBI:170014 (1)
CHEBI:143106 (1)
CHEBI:170052 (1)
CHEBI:170067 (1)
CHEBI:170072 (1)

Metabolite Name

Octadecanoicacid (1)
Perfluoroctanoic acid (PFOA) (1)
Hexadecanoicacid (1)
Xylenesulfonate (1)
2-Hydroxy glutaric acid (1)
Benazol P (1)
(1R,3R,4S,5R)-3,4-bis({[(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy})-1,5-dihydroxycyclohexane-1-carboxylic acid (1)
2-Heptyl-4-hydroxyquinoline-N-oxide (1)
2-({2-[4-(4-Fluorophenyl)piperazino]-2-oxoethyl}sulfanyl)acetic acid (1)
3-Desoxy-3,4-methylenedioxy pyrovalerone (1)
(+/-)-threo-Methylnaphthidate (1)
6-(2-chloroanilino)-4-oxo-2-(4-pyridyl)-3,4-dihydro-2H-1,3-thiazine-5-carbonitrile (1)
2-(4-Methoxybenzylidene)quinuclidin-3-one (1)
1-(Benzylamino)-3-(3,4-dimethylphenoxy)propan-2-ol (1)
2-Hydroxy-4'-(2-hydroxyethoxy)-2-methylpropiophenone (1)
4-(2-hydroxyphenyl)-8,9-dimethyl-2,3-dihydro-1H-1,5-benzodiazepin-2-one (1)
1-(1,3,3-Trimethyl-2,3-dihydro-1H-indol-2-yliden)acetone (1)
5-(2-Thienyl)nicotinic acid (1)
N-(4-Hydroxypentyl)-3-carboxyindole metabolite (1)
N1-(5-oxo-5,6,7,8-tetrahydronaphthalen-2-yl)acetamide (1)
3-Indolebutyricacid (1)
1,3,4,10-Tetrahydro-9(2H)-acridinone (1)
6-hydroxy-4-methyl-2-phenyl-2,3-dihydropyridazin-3-one (1)
2-oxo-1,2-dihydroquinoline-4-carboxylate (1)
NP-003319 (1)
2-(Methylamino)-2,3-dihydro-1H-benzo[de]isoquinoline-1,3-dione (1)
2-Hydroxy-2-methylbutyronitrile (1)
Norepinephrine(Noradrenaline) (1)
Methyl 2-[(2-methoxy-2-oxoethyl)amino]acetate (1)
Acetylarginine (1)

IsPrivate

False (3)

Submitter Keywords

FROG (1)
Not Peer Reviewed (1)

First Public Date

2024 (35)
2025 (30)
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2014 (30)
2023 (28)
2020 (28)
2022 (25)
2026 (22)
2017 (21)
2021 (17)
2018 (15)
2016 (14)
2015 (14)
2013 (6)
2011 (1)

Classification

bacteria (172)
viruses (3)

Modelling Approach

Constraint-based model (2)
Other (1)

Study type

Transcription profiling by array (36)
RNA-seq of coding RNA (17)
RNA-seq of non coding RNA (2)
Unknown experiment type (1)
Plant - High-throughput sequencing (1)
Comparative genomic hybridization by array (1)
ChIP-seq (1)
DNA-seq (1)
Genotyping by high throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2024 (41)
2023 (37)
2021 (35)
2022 (34)
2020 (33)
2025 (29)
2016 (26)
2015 (26)
2017 (22)
2014 (21)
2018 (21)
2019 (20)
2013 (18)
2011 (15)
2010 (15)
2012 (14)
2008 (14)
2009 (12)
2007 (6)
2006 (6)
2026 (5)
2005 (4)
2004 (2)
2001 (2)
2002 (1)
1999 (1)
1997 (1)

Lab affiliation

Division of Chemistry and Chemical Engineering California Institute of Technology (2)
Faculty of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences (2)
Departamento de Bioquímica, Instituto de Química, Universidade de São Paulo, Brazil (1)
Departamento de Microbiología y Parasitología, Facultad de Medicina, Universidad Nacional Autónoma de México, Ciudad Universitaria, Ciudad de México 04510, Mexico; rgarc@bq.unam.mx (1)
Department Structure and Function of Proteins Helmholtz Centre for Infection Research Inhoffenstr. 7, 38124 Braunschweig, Germany (1)
Department of Biomedical and Clinical Sciences, Faculty of Medicine and Health Sciences, Linköping University, Sweden (1)
Department of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, California, USA. (1)
Department of Plant Pathology, Entomology, and Microbiology Iowa State University (1)
Faculity Director: Caltech, Beckman Institute, Proteome Exploration Laboratory (1)
Geisel School of Medicine at Dartmouth (1)
Helmholtz Centre for Infection Research Dept. of Molecular Bacteriology Inhoffenstr. 7 D-38124 Braunschweig Germany (1)
Institute of Clinical Chemistry, Bioanalytics, University Medical Center Göttingen, Göttingen, Germany (1)
Interfakultäres Institut für Mikrobiologie und Infektionsmedizin Tübingen (IMIT) Institut für Medizinische Mikrobiologie und Hygiene Universität Tübingen Tübingen Germany (1)
John van Geest Cancer Research Centre, Nottingham Trent University, Nottingham NG11 8NS (1)
Laboratory of Gene Technology (LoGT), Katholieke Universiteit Leuven (KU Leuven) (1)
Lanzhou University, Lanzhou, Gansu, China (1)
Linkoping University (1)
Mass Spectrometry Technology Access Center (MTAC), McDonnell Genome Institute, Washington University, St. Louis (1)
Mass spectrometry research center, School of pharmacy University of Maryland, Baltimore (1)
Massachusetts Institute of Technology (1)
Molecular Biology, Princeton University, USA (1)
Molecular Microbiology Division, School of Life Sciences, University of Dundee (1)
New York University (1)
Normandie Univ, Laboratoire Polymères, Biopolymères, Surface, UMR 6270 CNRS, F-76821 Mont-Saint-Aignan, France Normandie Univ, PISSARO Proteomics Facility, IRIB, F-76821 Mont-Saint-Aignan, France (1)
Physiology, Anatomy and Microbiology - La Trobe University (1)
Research Core Unit Proteomics and Institute of Toxicology, Hannover Medical School, Hannover, Germany (1)
Responsable plateforme protéomique et analyse fonctionnelle des proteines IHU Mediterranée infection Marseille FRANCE (1)
UCD Conway Institute of Biomolecular & Biomedical Research, University College Dublin, Dublin, Ireland (1)
Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, PBS UMR 6270, Rouen, France (1)
University of Dundee, School of Life Sciences, Molecular Microbiology Division (1)

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Microarray for suspension cells of PA14 WT with and without NE (50 uM and 500 uM) for 7 h

It has been proposed that the gastro-intestinal tract environment containing high levels of neuroendocrine hormones is important for gut-derived P. aeruginosa infections. In this study, we report that the hormone norepinephrine increases P. aeruginosa PA14 growth, virulence factor production, invasi...

ORGANISM(S): Pseudomonas aeruginosa UCBPP-PA14

2009-08-27 | E-GEOD-13326 | biostudies-arrayexpress

The P. aeruginosa PA14 transcriptome recorded under 14 different experimental conditions

We analyzed the transcriptional profile of P.aeruginosa PA14 grown under 14 different environmental conditions. These included conditions of growth within biofilms, at various temperatures, osmolarities and phosphate concentrations, under anaerobic conditions, attached to a surface and conditions en...

ORGANISM(S): Pseudomonas aeruginosa

2015-06-16 | E-GEOD-55197 | biostudies-arrayexpress

RNA-seq study of major P.aeruginosa PA14 transcription factors

Gene regulation via transcription factors influences the metabolic, adaptive and pathogenic capabilities of the organism. We report the transcriptomes of the mutants of six major P. aeruginosa PA14 trancription factors - RhlR, LasR, Anr, GacA, FleQ and CbrB. The P. aeruginosa PA14 transposon mutants...

ORGANISM(S): Pseudomonas aeruginosa

2016-03-01 | E-GEOD-55328 | biostudies-arrayexpress

Pseudomonas aeruginosa PA14 isolate:PA14

Pseudomonas aeruginosa PA14 isolate:PA14 Genome sequencing

PRJNA1028549 | ENA

Pseudomonas aeruginosa PA14

Experimental evolution of uninfected PA14 and PA14 infected with temperate virus DMS3

PRJNA1021667 | ENA

Pseudomonas aeruginosa PA14

Pseudomonas aeruginosa PA14 Transcriptome

PRJNA421184 | ENA

Pseudomonas aeruginosa PA14