Paa - OmicsDI

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Unknown (928)
Transcriptomics (354)
Genomics (141)
Proteomics (47)
Metabolomics (6)
Methylation profiling (1)
Other (1)

Organisms

Homo sapiens (222)
Mus musculus (110)
Sus scrofa (9)
Thermus thermophilus HB8 (4)
Rattus norvegicus (4)
Penicillium chrysogenum (4)
Listeria monocytogenes (4)
Caenorhabditis elegans (3)
Squalius pyrenaicus (2)
Oncorhynchus mykiss (2)
Canis lupus familiaris (2)
Gallus gallus (2)
Arabidopsis thaliana (2)
Pseudomonas aeruginosa PAO1 (2)
Escherichia coli (2)
Drosophila melanogaster (2)
Epinephelus coioides (1)
Squalius alburnoides (1)
Listeria monocytogenes EGD-e (1)
Aspergillus fumigatus (1)
Neisseria meningitidis (1)
Solanum lycopersicum (1)
Candida albicans (1)
Escherichia coli O104:H4 (1)
Escherichia coli 042 (1)
Lichtheimia corymbifera (1)
Lacticaseibacillus rhamnosus (1)
Escherichia coli O157:H7 str. EDL933 (1)
Escherichia coli O157:H7 str. Sakai (1)
Escherichia coli O157:H7 (1)

Organisms

Homo sapiens (25)
Mus musculus (10)
Penicillium chrysogenum (3)
Quasipaa boulengeri (2)
Escherichia coli 042 (2)
Listeria monocytogenes (2)
Oncorhynchus mykiss (2)
Escherichia coli (2)
Escherichia coli O104:H4 (1)
Lacticaseibacillus casei BL23 (1)
Helicobacter pylori Rif2 (1)
Helicobacter pylori Rif1 (1)
Enterocloster alcoholdehydrogenati (1)
Phocoenobacter atlanticus subsp. atlanticus (1)
Salmonella enterica subsp. enterica serovar Heidelberg (1)
Salmo salar (1)
Brassica rapa (1)
Pseudomonas aeruginosa PAO1 (1)
Lactuca sativa (1)
Gallus gallus (1)
Glycine max (1)
Arabidopsis thaliana (1)
gut metagenome (1)

Repository

biostudies-arrayexpress (363)
ENA (110)
pride (45)
geo (29)
MetaboLights (6)
jPOST (1)

Tissue

Cell culture (21)
Epithelial cell (7)
Permanent cell line cell (5)
Fibroblast (4)
Plant cell (3)
Cell suspension culture (3)
Myotube (2)
Bone marrow (2)
Stem cell (2)
Leaf (2)
Lung (2)
Blood (2)
RMC-1 cell (1)
Mammary luminal epithelial cell (1)
Skeletal muscle cell line (1)
Mammary gland epithelial cell (1)
Skeletal muscle myoblast (1)
Natural killer cell (1)
Embryonic fibroblast (1)
Seed (1)
JURKAT cell (1)
Adipose tissue (1)
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Oocyte (1)
Heart (1)
Brain (1)
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Disease

Pancreatic ductal adenocarcinoma (3)
HHV-6B infected (2)
Malignant melanoma (2)
Acute promyelocytic leukemia (2)
Normal (2)
Pancreatic cancer (2)
Breast cancer (2)
Disease free (2)
Rheumatoid arthritis (1)
Colorectal carcinoma (1)
Colorectal adenocarcinoma (1)
Prostate carcinoma (1)
Adenocarcinoma (1)
Control (1)
Ewing's sarcoma (1)
Bone disease (1)
Bone remodeling disease (1)
Blindness (1)
Peanut allergy (1)
Plasmodium falciparum malaria (1)
Chikungunya (1)
Prostate cancer (1)
Influenza (1)
Acute leukemia (1)

Technology Type

Mass Spectrometry (45)
Shotgun proteomics (30)
Affinity purification coupled with mass spectrometry proteomics (11)
Gel-based experiment (8)
Mass spectrometry (5)
Immunopeptidomics (3)
SWATH MS (2)
Data-independent acquisition (2)
Data-dependent acquisition (2)
Bottom-up proteomics (2)
NMR spectroscopy (1)
All-ion fragmentation (1)
SRM/MRM (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Illumina HiSeq 2500 (9)
Illumina HiSeq 1500 (6)
NextSeq 500 (5)
Illumina NovaSeq 6000 (3)
Illumina HiSeq 2000 (3)
Affymetrix GeneChip(R) HT Scanner (2)
Illumina Genome Analyzer II (2)
Illumina HiSeq 4000 (2)
Exactive (Thermo Scientific) (2)
MoFlo XPD (Beckman Coulter, Fullerton, CA, USA) flow cytometer (1)
Agilent G2505C (1)
AB SOLiD System 3.0 (1)
ScanArray [PerkinElmer] (1)
G2565AA DNA microarray scanner [Agilent] (1)
Illumina Genome Analyzer IIx (1)
Generation III Array Scanner [Amersham] (1)
Illumina NovaSeq X (1)
Ion Torrent Proton (1)
NextSeq 2000 (1)
DNBSEQ-G400 (1)
Illumina HiSeq 1000 (1)
Liquid Chromatography MS - negative (1)
Bruker (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2015 (62)
2014 (59)
2013 (53)
2012 (43)
2011 (39)
2010 (37)
2016 (27)
2009 (16)
2019 (15)
2017 (13)
2023 (12)
2021 (10)
2008 (10)
2024 (9)
2022 (9)
2018 (8)
2025 (7)
2026 (5)
2020 (4)
2006 (3)
2007 (2)
2005 (1)

CHEBI ID

CHEBI:15428 (3)
CHEBI:1157 (2)
CHEBI:17764 (2)
CHEBI:15425 (2)
CHEBI:28297 (2)
CHEBI:17232 (2)
CHEBI:7274 (2)
CHEBI:27468 (2)
CHEBI:30832 (2)
CHEBI:16600 (2)
CHEBI:116314 (2)
CHEBI:17385 (2)
CHEBI:73514 (2)
CHEBI:17821 (2)
CHEBI:15891 (2)
CHEBI:7916 (2)
CHEBI:17509 (2)
CHEBI:17755 (2)
CHEBI:15727 (2)
CHEBI:15676 (2)
CHEBI:73024 (2)
CHEBI:17568 (2)
CHEBI:16335 (2)
CHEBI:16750 (2)
CHEBI:16027 (2)
CHEBI:32816 (2)
CHEBI:17822 (2)
CHEBI:16737 (2)
CHEBI:16919 (2)
CHEBI:26986 (2)

Metabolite Name

3-Hydroxy-2-methylpyridine-4,5-dicarboxylate (3)
2-C-Methyl-D-erythritol 4-phosphate (3)
Phenylacetylglycine (3)
UMP (3)
Guanosine (3)
Inosine (3)
Pseudouridine (3)
3-Formyl-6-hydroxyindole (2)
4-Acetamidobutanoate (2)
N-Succinyl-L-glutamate (2)
4-Hydroxyquinoline (2)
1-Pyrrolidinecarboxaldehyde (2)
N-Acetylvaline (2)
N-Feruloylglycine (2)
2-Acetolactate (2)
Adenylyl sulfate (2)
O-Phospho-L-homoserine (2)
Diacetyl (2)
D-Glycerate (2)
S-Succinylglutathione (2)
N-Heptanoylglycine (2)
Urate (2)
Alpha-D-Glucosamine 1-phosphate (2)
Gamma-Glutamyl-beta-cyanoalanine (2)
3-Oxopropanoate (2)
Hippurate (2)
S-Sulfo-L-cysteine (2)
N-Acetyl-L-glutamate (2)
2-Hydroxyethanesulfonate (2)
Lidocaine (2)

First Public Date

2014 (19)
2025 (13)
2023 (13)
2026 (12)
2024 (9)
2022 (9)
2017 (7)
2020 (6)
2021 (5)
2018 (5)
2015 (5)
2016 (3)
2013 (3)
2019 (1)

Classification

bacteria (11)

Modification

2x(15)N labeled L-lysine (2)
4x(15)N labeled L-arginine (2)

Study type

Transcription profiling by array (245)
RNA-seq of coding RNA (33)
ChIP-seq (24)
RNA-seq of non coding RNA (15)
Methylation profiling by array (9)
Comparative genomic hybridization by array (5)
ChIP-chip by tiling array (3)
MicroRNA profiling by array (3)
RNA-seq of coding RNA from single cells (3)
Methylation profiling by high throughput sequencing (3)
Unknown experiment type (2)
Transcription profiling by tiling array (2)
Other (2)
Animal - High-throughput sequencing (1)
ChIP-chip by array (1)
Genotyping by array (1)
Transcription profiling by RT-PCR (1)
MicroRNA profiling by high throughput sequencing (1)
Bisulfite-seq (1)
ATAC-seq (1)
Ribo-seq (1)
Proteomic profiling by array (1)
RNA-seq of total RNA (1)

Release Date

2023 (124)
2025 (115)
2022 (105)
2021 (104)
2020 (86)
2014 (82)
2024 (77)
2013 (76)
2015 (72)
2012 (60)
2019 (58)
2018 (55)
2011 (55)
2016 (52)
2010 (49)
2017 (39)
2026 (25)
2009 (23)
2008 (13)
2006 (7)
2007 (4)
2005 (4)
2004 (2)
2002 (2)
2003 (1)
2000 (1)

Lab affiliation

Medical bioanalytics Institute for ophthalmic research Eberhard-Karls-University Tuebingen (3)
Department of Biochemistry and Molecular Biology and the Biomedicine Discovery Institute; Monash University; Clayton 3800; Victoria; Australia (3)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg im Breisgau, Germany (3)
Department of Pediatrics, University of Groningen, University Medical Center Groningen (UMCG), 9713 AV Groningen, The Netherlands (2)
Max Planck Institute of Biochemistry Proteomics and Signal Transduction Am Klopferspitz 18 82152 Martinsried Germanry (1)
Freie Universität Berlin Institut für Biologie-Mikrobiologie (1)
NNF Center for Protein Research University of Copenhagen Blegdamsvej 3b, DK-2200 Copenhagen N (1)
Uni Greifswald Hausdorffstrasse 8 17489 Greifswald (1)
Robert Koch Institute FG17 - Influenza and Other Respiratory Viruses Seestraße 10, 13353 Berlin, Germany (1)
Université Paris Cité, IRD, UMR261, MERIT, F-75006 Paris,France. (1)
Medizinische Proteom-Center 44801 Bochum, Germany (1)
Max Planck Institute for Molecular Biomedicine, Bioanalytical Mass Spectrometry, Röntgenstr. 20, D-48149 Münster Germany (1)
Medical Proteome Center Eberhard-Karls University of Tuebingen (1)
Department of Molecular Microbiology, Washington University School of Medicine, St Louis, MO 63110, USA. (1)
Cornell University, Ithaca NY (USA) (1)
Proteomics and Signal Transduction, Max-Planck-Institute of Biochemistry, Am Klopferspitz 18, 82152 Martinsried, Germany (1)
Institute for Genetics, Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), 50931 Cologne, Germany. (1)
Rheumatology Unit, Department of Medicine, Solna, Karolinska Institutet, Karolinska University Hospital in Solna, Stockholm, Sweden (1)
Department of Immunohematology and Blood Transfusion, Leiden University Medical Center (1)
Functional Genomics, University Medicine Greifswald, Germany (1)
Institute for Ophthalmic Research, Centre for Ophthalmology, University of Tübingen, Germany (1)
Centre for Organismal Studies (COS) Heidelberg Im Neuenheimer Feld 360 69120 Heidelberg Fon +49 6221 54-6286 Fax +49 6221 54-5859 (1)
Tanja Cirković Velickovic, Professor, University of Belgrade - Faculty of Chemistry, Department of Biochemistry and Centre of Excellence for Molecular Food Sciences; Member of Serbian Academy of Sceinces and Arts; Ghent University Global Campus, Incheon, South Korea; aculty of Bioscience Engineering, Ghent University,Belgium. (1)
Institute of Microbiology, University of Greifswald, Felix-Hausdorff-Str. 8, 17489 Greifswald, Germany (1)
Professor of protein technology, Department of Immunotechnology, Lund University, Lund, Sweden (1)
Genetics & Experimental Bioinformatics University of Freiburg Institute of Biology III Schänzlestraße 1 D-79104 Freiburg Germany (1)
Technical University of Munich, School of Medicine, Institute of Virology, Munich, Germany (1)
Medizinisches Proteom-Center (1)
Head Proteomics Group, Leiden University Medical Center, Center for Proteomics and Metabolomics, PO Box 9600, Postal zone P1-Q, 2300 RC Leiden, The Netherlands (1)
Proteomics Center, Erasmus MC, Rotterdam, the Netherlands (1)

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PAA and the A. baumannii ATCC17978 proteome

Analysis of proteome changes in respond to PAA, PAA+ST, DMSO and ST.

ORGANISM(S): Acinetobacter baumannii

2022-04-06 | PXD025651 | Pride

Proteomics A. baumannii Paa

Listeria monocytogenes transcriptional response to low concentrations of paracetic acid (PAA)

PRJNA1121365 | ENA

Listeria monocytogenes transcriptional response to low concentrations of paracetic acid (PAA)

Peracetic acid (PAA), a strong oxidizing agent, has been widely used as a disinfectant in food processing settings as it does not produce harmful chlorinated by-products. In the present study, the transcriptional response of Listeria monocytogenes to 2.5 ppm of PAA was assessed using RNA-sequencing ...

ORGANISM(S): Listeria monocytogenes

2024-10-04 | GSE269393 | GEO

Ecotoxicity Evaluation of Pure Peracetic Acid (PAA) after Eliminating Hydrogen Peroxide from Commercial PAA.

Not available

S-EPMC7400010 | biostudies-literature

Phocoenobacter atlanticus subsp. atlanticus strain:Paa-1-UiB-2019

Phocoenobacter atlanticus subsp. atlanticus strain:Paa-1-UiB-2019 Genome sequencing

PRJNA1403781 | ENA

PAA-TnSeq-raw-data

PRJNA1186370 | ENA

Paa spinsa gut metagenome

gut metagenome Targeted loci environmental