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TranscriptomicsDormancy of green-cotyledon Col seeds matured at 20°C vs 15°C
To determine genes involved in induction of dormancy in response to reduced maturation temperatures, RNA sequencing was performed on developing seeds matured at 20°C, where low dormancy is observed, and compared to seeds matured at 15°C where high dormancy is observed. Col green cotyledon seeds matu...
ORGANISM(S): Arabidopsis thaliana 
2014-09-04 | E-GEOD-61061 | biostudies-arrayexpress
TranscriptomicsHOS1 versus hos1 mRNA sequencing
Sequencing of mRNA extracted from 14 day old Columbia and hos1-3 seedlings grown at 22C 12:12 light dark Cold acclimation has been shown to be attenuated by the degradation of the INDUCER OF CBF EXPRESSION1 protein by the E3 ubiquitin ligase HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES1 (HOS1). H...
ORGANISM(S): Arabidopsis thaliana 
2016-07-21 | E-GEOD-84606 | biostudies-arrayexpress
UnknownThe cost of phage resistance in a plant pathogenic bacterium is context-dependent.
Not available
S-EPMC4979666 | biostudies-literature
GenomicsAbo1, a conserved bromodomain AAA-ATPase maintains global nucleosome occupancy and organization
Maintenance of the correct level and organization of nucleosomes is crucial for genome function. Here we uncover a role for a conserved bromodomain AAA-ATPase, Abo1, in maintenance of nucleosome architecture in fission yeast. Cells lacking abo1+ experience both a reduction and mis-positioning of nuc...
ORGANISM(S): Schizosaccharomyces pombe 
2015-10-30 | E-GEOD-67410 | biostudies-arrayexpress
UnknownChromatin particle spectrum analysis: a method for comparative chromatin structure analysis using paired-end mode next-generation DNA sequencing.
Not available
S-EPMC3061068 | biostudies-literature
TranscriptomicsTranscriptomic profiles of zebrafish embryos exposed to silver (nanoparticles, bulk and ions) using HT-SuperSAGE in a Illumina GA2 platform
Silver nanoparticles cause toxicity in exposed organisms and are an environmental health concern. The mechanisms of silver nanoparticle toxicity, however, remain unclear. We examined the effects of exposure to silver in nano-, bulk- and ionic forms on zebrafish embryos (Danio rerio) using a Next Gen...
ORGANISM(S): Danio rerio 
2013-06-17 | E-GEOD-38125 | biostudies-arrayexpress
UnknownMeiotic Genes in Colpodean Ciliates Support Secretive Sexuality.
Not available
S-EPMC5570047 | biostudies-literature
UnknownThe impact of the HIRA histone chaperone upon global nucleosome architecture.
Not available
S-EPMC4614360 | biostudies-literature
UnknownGenomic dissection of the 1994 Cronobacter sakazakii outbreak in a French neonatal intensive care unit.
Not available
S-EPMC4594962 | biostudies-literature
UnknownAssessing the performance of the Oxford Nanopore Technologies MinION.
Not available
S-EPMC4691839 | biostudies-literature
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