Paterson S S - OmicsDI

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Unknown (1213)
Proteomics (33)
Transcriptomics (14)
Metabolomics (2)
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Organisms

Aerococcus urinae NBRC 15544 = CCUG 36881 (32)
Allexis (32)
Canis lupus familiaris (32)
Carya cathayensis (32)
Clostridioides difficile 630 (32)
Cyanophora paradoxa (32)
Ensifer adhaerens (32)
Enterococcus faecalis (32)
Globicatella sanguinis (32)
Histomonas meleagridis (32)
Human immunodeficiency virus 1 (32)
Listeria monocytogenes (32)
Marchantia polymorpha (32)
Methylohalobius crimeensis 10Ki (32)
Mus musculus (32)
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Ophrys garganica (32)
Ophrys sphegodes (32)
Physcomitrium patens (32)
Pseudomonas aeruginosa SJTD-1 (32)
Pseudomonas putida KT2440 (32)
Rattus norvegicus (32)
Rhizobium sp. Leaf68 (32)
Schizosaccharomyces pombe 927 (32)
Schizosaccharomyces pombe 972h- (32)
Homo sapiens (9)
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pride (32)
biostudies-arrayexpress (14)
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Mass Spectrometry (32)
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Instrument Platform

NextSeq 500 (2)
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CHEBI ID

CHEBI:166451 (1)
CHEBI:154179 (1)
CHEBI:44383 (1)
CHEBI:61564 (1)
CHEBI:2412 (1)
CHEBI:32159 (1)
CHEBI:882 (1)
CHEBI:131623 (1)
CHEBI:32321 (1)
CHEBI:32357 (1)
CHEBI:43980 (1)
CHEBI:59226 (1)
CHEBI:166606 (1)
CHEBI:52617 (1)
CHEBI:43983 (1)
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CHEBI:143095 (1)
CHEBI:30833 (1)
CHEBI:36458 (1)
CHEBI:95115 (1)
CHEBI:40968 (1)
CHEBI:16285 (1)
CHEBI:165191 (1)
CHEBI:28374 (1)
CHEBI:89454 (1)
CHEBI:16388 (1)
CHEBI:85039 (1)
CHEBI:33946 (1)
CHEBI:90483 (1)

Metabolite Name

Tetrahydrocortisone (1)
Skatol (1)
P-toluic acid (1)
N-methylleucine (1)
N-carbamoylputrescine (1)
Narirutin (1)
M-tyramine (1)
Harmane (1)
Guanosine-2',3'-cyclic monophosphate (1)
Bufotenine (1)
Astaxanthin (1)
5-hydroxymethylfurfural (1)
4-hydroxycyclohexylcarboxylic acid (1)
3-hydroxybenzoate (1)
3-dehydrodeoxycholate (1)
12-ketolithocholate (1)
(R)-salsolinol (1)
Geranyllinalool (1)
Sucralose (1)
Methylurea (1)
1,3-propanediol (1)
Acetylagmatine (1)
1-methylhypoxanthine (1)
7-ketocholesterol (1)
Glutamyl-meso-diaminopimelate (1)
Sitostanol (1)
Ursocholate (1)
Tyrosol (1)
P-hydroxybenzaldehyde (1)
P-cresol (1)

Study type

Transcription profiling by array (7)
CLIP-seq (2)
RNA-seq of coding RNA (2)
Transcription profiling by tiling array (1)
Comparative genomic hybridization by array (1)
RNA-seq of total RNA (1)

Release Date

2022 (134)
2023 (132)
2021 (118)
2020 (94)
2025 (86)
2024 (79)
2017 (67)
2015 (63)
2019 (63)
2018 (62)
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2014 (48)
2011 (44)
2013 (39)
2012 (37)
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2026 (13)
2008 (13)
2006 (10)
2007 (8)
2005 (5)
2004 (2)
2001 (2)
2000 (2)
2003 (1)
2002 (1)
1999 (1)

Lab affiliation

Bioplatforms Australia (7)
UPR 9002 CNRS-ARN Université De Strasbourg IBMC (2)
Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany (1)
BSRC, University of St Andrews, UK (1)
Biomedical Sciences Research Complex, University of St Andrews (1)
Bioplatforms Australia (project manager) (1)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (1)
CRUK Beatson Institute (1)
Department of Surgery and Anaesthesia, University of Otago (Wellington) (1)
Departmento de Bioquíimica y Biologíia Molecular, Universitat de Valèencia, Burjassot, Valencia, Spain (1)
Division of Cancer Biology, Institute of Cancer Research, 237 Fulham Road, London SW3 6JB, UK. (1)
Food Science Research Institue (CIAL, CSIC-UAM) (1)
Globe Institute, University of Copenhagen, Denmark (1)
Harvard Medical School, Boston, USA Instituto de Investigación Sanitaria del Principado de Asturias (ISPA), Oviedo, Spain (1)
Head of Proteomics and Metabolomics Facility (1)
Institute for Global Food Security School of Biological Sciences Queen's University Belfast 19 Chlorine Gardens Belfast, BT9 5DL (1)
Institute of Cancer Research, Division of Cancer Biology, 237 Fulham Road, London SW3 6JB, UK. (1)
Novo Nordisk Foundation Center for Protein Research, Proteomics Program, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark. (1)
PRBB, Institute of Evolutionary Biology (UPF-CSIC), Dr. Aiguader 88, 8003 Barcelona, Spain Catalan Institution of Research and Advanced Studies (ICREA), Passeig de Lluís Companys, 23, 08010, Barcelona, Spain Centro Nacional de Análisis Genómico (CNAG), Baldiri i Reixac 4, 08028 Barcelona, Spain Institut Català de Paleontologia Miquel Crusafont, Universitat Autònoma de Barcelona Edifici ICTA-ICP, c/ Columnes s/n, 08193 Cerdanyola del Vallès, Barcelona, Spain (1)
Proteomics & Metabolomics Facility MRC London Institute of Medical Sciences, Du Cane Road, London W12 0NN, United Kingdom (1)
Section for Evolutionary Genomics, GLOBE Institute, University of Copenhagen, Copenhagen, Denmark (1)
Section of Investigative Medicine Imperial College London (1)
The University of Queensland, Centre for Clinical Research, Faculty of Medicine. (1)
University of Geneva (1)
Université de Strasbourg, CNRS, Architecture et Réactivité de l’ARN, 67084 Strasbourg, France (1)

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Time course-proteomics analysis was performed in four biological replicates of S. aureus grown in rich medium

The growth of S. aureus HG001 was followed accros time in a time-course proteomic analysis.

ORGANISM(S): Staphylococcus aureus

2026-09-07 | PXD071060 | Pride

Programmed fluctuations in sense/antisense transcript ratios drive sexual differentiation in S. pombe.

Not available

S-EPMC3738847 | biostudies-literature

Transmission Genetics of a Sorghum bicolor × S. halepense Backcross Populations.

Not available

S-EPMC7203413 | biostudies-literature

Mrc1 and Tof1 regulate DNA replication forks in different ways during normal S phase.

Not available

S-EPMC1995724 | biostudies-literature

The S. pombe cytokinesis NDR kinase Sid2 activates Fin1 NIMA kinase to control mitotic commitment through Pom1/Wee1.

Not available

S-EPMC4284365 | biostudies-literature

Identification of direct transcriptional targets of V600EBRAF/MEK in melanoma

A375P melanoma cells were treated with 1uM of the MEK inhibitor PD184352 or 0.4uM of the V600EBRAF inhibitor PLX4720 for 2hr, 6hr and 24hrs. DMSO treatment for 2hr, 6hr and 24hrs serves as the negative control Triplicate experiments were performed for DMSO, PD184352 and PLX4720 treatment at 3 timepo...

ORGANISM(S): Homo sapiens

2010-08-18 | E-GEOD-17089 | biostudies-arrayexpress

The S. pombe translation initiation factor eIF4G is Sumoylated and associates with the SUMO protease Ulp2.

Not available

S-EPMC4018355 | biostudies-literature

Extracellular ATP Induced S-Phase Cell Cycle Arrest via P2Y Receptor-Activated ERK Signaling in Poorly Differentiated Oral Squamous Cell Carcinoma SAS Cells.

Not available

S-EPMC8624497 | biostudies-literature

Transient structure associated with the spindle pole body directs meiotic microtubule reorganization in S. pombe.

Not available

S-EPMC3382715 | biostudies-literature

H₂O₂ stress-specific regulation of S. pombe MAPK Sty1 by mitochondrial protein phosphatase Ptc4.