Pearson John J - OmicsDI

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Unknown (197)
Genomics (45)
Transcriptomics (13)
Metabolomics (3)
Proteomics (3)
Genomic (1)

Organisms

Homo sapiens (50)
Daphnia pulex (5)
Alphavirus (3)
Anemia (3)
Archaea (3)
Bacteria (3)
Betaherpesvirinae (3)
Borrelia (3)
Clostridium perfringens (3)
Cowpox virus (3)
Coxsackievirus (3)
Cytomegalovirus (3)
Dengue virus (3)
EFO:0001352 (3)
Hepatitis B virus (3)
Human alphaherpesvirus 1 (3)
Human betaherpesvirus 5 (3)
Human immunodeficiency virus (3)
Influenza A virus (3)
Influenza C virus (3)
Japanese encephalitis virus group (3)
Listeria monocytogenes (3)
Mammarenavirus (3)
Miscanthus x giganteus (3)
Mycobacterium tuberculosis (3)
Oropouche virus (3)
Rattus (3)
Plasmodium falciparum 3D7 (1)
Rattus norvegicus (1)
Mus musculus (1)

Repository

EGA (45)
biostudies-arrayexpress (13)
MetaboLights (3)
pride (3)
dbGaP (1)

Tissue

Bone marrow (1)
Bone marrow macrophage (1)
Seminal fluid (1)

Disease

Melanoma (1)

Technology Type

Mass spectrometry (3)
Mass Spectrometry (3)
Shotgun proteomics (2)
Illumina 1.2M, Illumina 610K Quad, Affymetrix 6.0 (1)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
Illumina HiSeq 2500 (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Bottom-up proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (2)
Gas Chromatography MS - (1)
Direct infusion MS - positive (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2011 (6)
2015 (3)
2022 (3)
2016 (1)
2014 (1)
2008 (1)
2005 (1)
2024 (1)
2023 (1)
2025 (1)

CHEBI ID

CHEBI:16765 (2)
CHEBI:17822 (2)
CHEBI:26271 (2)
CHEBI:22660 (2)
CHEBI:26986 (2)
CHEBI:16811 (2)
CHEBI:24898 (2)
CHEBI:28044 (2)
CHEBI:27266 (2)
CHEBI:16411 (2)
CHEBI:25094 (2)
CHEBI:18237 (2)
CHEBI:18295 (2)
CHEBI:15741 (2)
CHEBI:16449 (2)
CHEBI:27897 (2)
CHEBI:28865 (2)
CHEBI:183053 (1)
CHEBI:190216 (1)
CHEBI:180468 (1)
CHEBI:141311 (1)
CHEBI:137195 (1)
CHEBI:137899 (1)
CHEBI:178052 (1)
CHEBI:187785 (1)
CHEBI:142363 (1)
CHEBI:78128 (1)
CHEBI:78068 (1)
CHEBI:79007 (1)
CHEBI:78127 (1)

Metabolite Name

2-3-dihydroxypropane-1-sulfonate (1)
2-3-dihydroxybenzoic acid (1)
Phosphatidylinositol 40:7 (1)
Phosphatidylinositol 38:3 (1)
Phosphatidylserine 42:4 (1)
Phosphatidylinositol 36:0 (1)
Phosphatidylcholine 42:4 (1)
Phosphatidylinositol 36:1 (1)
Phosphatidylcholine 42:5 (1)
Phosphatidylserine 42:8 (1)
Phosphatidylinositol 40:5 (1)
Phosphatidylinositol 40:6 (1)
Phosphatidylcholine 40:2 (1)
Phosphatidylserine 40:3 (1)
Phosphatidylserine 40:5 (1)
Phosphatidylinositol 38:1 (1)
Phosphatidylinositol 38:4 (1)
Phosphatidylinositol 38:5 (1)
Phosphatidylinositol 38:6 (1)
Phosphatidylserine 38:1 (1)
Sphingomyelin 42:0 (1)
Phosphatidylserine 38:3 (1)
Sphingomyelin 42:2 (1)
Phosphatidylserine 42:2 (1)
Phosphatidylcholine 38:3 (1)
Phosphatidylserine 38:4 (1)
Phosphatidylserine 42:3 (1)
Phosphatidylcholine 38:4 (1)
Phosphatidylglycerol 43:6 (1)
Phosphatidic acid 44:6 (1)

Study type

Transcription profiling by array (10)
Methylation profiling by array (2)
Comparative genomic hybridization by array (1)

Release Date

2022 (29)
2023 (24)
2021 (23)
2024 (20)
2025 (15)
2020 (15)
2015 (13)
2019 (11)
2014 (10)
2018 (10)
2016 (9)
2012 (8)
2011 (6)
2013 (6)
2017 (3)
2008 (2)
2010 (2)
2009 (2)
2005 (1)
1999 (1)

Lab affiliation

Cutaneous Oncology and Immunology Moffitt Cancer Center Tampa, FL, USA (1)
School of Environmental and Life Sciences, College of Engineering, Science and Environment, The University of Newcastle, University Drive, Callaghan, NSW 2308, Australia. Infertility and Reproduction Research Program, Hunter Medical Research Institute, New Lambton Heights, NSW 2305, Australia. (1)
The Walter and Eliza Hall Institute of Medical Research Parkville VIC 3052, Australia Department of Medical Biology University of Melbourne Parkville VIC 3010, Australia (1)

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Evolutionary Diversification of Duplicated Genes; Experiment J

This study measured the rates at which duplicated genes in the Daphnia pulex genome diverge in function, based on significant differences in their gene expression when paralogs of various ages were tested across 8 to 12 contrasting conditions. The conditions were designated A to L. The number and d...

ORGANISM(S): Daphnia pulex

2011-02-01 | E-GEOD-25850 | biostudies-arrayexpress

Analysis of quorum-sensing-dependent control of rhizosphere-expressed (rhi) genes in Rhizobium leguminosarum bv. viciae.

Not available

S-EPMC93861 | biostudies-literature

Evaluation of hyperacute infarct volume using ASPECTS and brain CT perfusion core volume.

Not available

S-EPMC5567320 | biostudies-literature

Exosomal MicroRNAs in Pregnancy Provides Insight into a Possible Cure for Cancer.

Not available

S-EPMC7432616 | biostudies-literature

Comparison of Hospital Online Price and Telephone Price for Shoppable Services.

Not available

S-EPMC10507593 | biostudies-literature

GWAS of Preterm Birth

Preterm birth (PTB, born before 37 weeks of gestation) is a leading cause of neonatal mortality and post-natal morbidity. PTB affects one in nine all live births in the U.S. Notably, the highest rate of PTB occurs among African Americans (one in six). PTB is a complex trait, likely determined by ...

phs000332 | dbGaP

Frequent infection of neurons by SV40 virus in SIV-infected macaque monkeys with progressive multifocal leukoencephalopathy and meningoencephalitis.

Not available

S-EPMC5704577 | biostudies-literature

Effects of Sex, Strain, and Energy Intake on Hallmarks of Aging in Mice

Calorie restriction (CR) is the most robust non-genetic intervention to universally delay the onset of age-related diseases and extend mean and maximum lifespan. However, species, strain, sex, diet, age of onset, and level of CR are emerging as important variables to consider for a successful CR res...

ORGANISM(S): Mus musculus

2016-06-27 | E-GEOD-81959 | biostudies-arrayexpress

CRMnet: A deep learning model for predicting gene expression from large regulatory sequence datasets.

Not available

S-EPMC10043243 | biostudies-literature

Isolation of an asymmetric RNA uncoating intermediate for a single-stranded RNA plant virus.

Not available

S-EPMC4330335 | biostudies-literature