Pedersen K K - OmicsDI

Show results for

Unknown (2039)
Genomics (77)
Transcriptomics (45)
Proteomics (33)
Metabolomics (11)
Models (1)
Multiomics (1)

Organisms

Homo sapiens (88)
Chlamydomonas reinhardtii (29)
Pseudomonas canadensis (29)
Marchantia polymorpha subsp. ruderalis (29)
Methylocystis sp. (29)
Exiguobacterium sp. SH31 (29)
Porites pukoensis (29)
Porphyromonas gingivalis W83 (29)
Bothrops insularis (29)
Bothrops jararaca (29)
Bothrops jararacussu (29)
Bothrops cotiara (29)
Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 (29)
Dinosauria (29)
Trypanosoma vivax Y486 (29)
Streptomyces coelicolor (29)
Pseudomonas taiwanensis (29)
Burkholderia ubonensis MSMB22 (29)
Mus musculus (21)
Streptococcus thermophilus (2)
Macaca mulatta (2)
Danio rerio (2)
Bifidobacterium animalis subsp. lactis BB-12 (1)
Lactococcus lactis subsp. lactis (1)
Blumeria graminis (1)
Neurospora crassa (1)
Salmo salar (1)
Saccharomyces cerevisiae (1)
Arabidopsis thaliana (1)
Eremophila rugosa (1)

Repository

EGA (66)
biostudies-arrayexpress (56)
pride (29)
MetaboLights (10)
MassIVE (4)
BioModels (1)
GNPS (1)

Tissue

Cell culture (10)
Blood plasma (3)
Fibroblast (2)
Liver (2)
Ovary epithelium cell line (1)
Neuroblast (1)
Extracellular vesicle (1)
Primary cell (1)
Dendritic cell (1)
Blood (1)
Permanent cell line cell (1)
Blood cell (1)
Cell suspension culture (1)
T cell (1)

Disease

Neuroblastoma (2)
Disease free (2)
Lung cancer (2)
Diffuse large B-cell lymphoma (1)
Skin amelanotic melanoma (1)
Non-alcoholic steatohepatitis (1)
Skin melanoma (1)
Melanoma (1)
Alzheimer's disease (1)

Technology Type

Mass Spectrometry (29)
Shotgun proteomics (9)
Mass spectrometry (6)
Bottom-up proteomics (6)
Illumina HiSeq 2000 (4)
Data-dependent acquisition (4)
Chemical cross-linking coupled with mass spectrometry proteomics (4)
NMR spectroscopy (3)
Top-down proteomics (3)
Affinity purification coupled with mass spectrometry proteomics (3)
Illumina HiSeq 2500, ILLUMINA (1)
CAPILLARY, AB 3730xL Genetic Analyzer (1)
Illumina HiSeq 2000, GenomeWideSNP_6-BirdseedV2 (1)
ILLUMINA, Illumina HiSeq 2000 (1)
Illumina HumanHap 550K, Illumina HumanHap300-Duo (1)
Unknown (1)
Mass spectrometry assay (1)
Affinity proteomics (1)
Gel-based experiment (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

Illumina NovaSeq 6000 (4)
NextSeq 500 (4)
Q Exactive (3)
Xevo G2 QTOF (Waters) (3)
Illumina HiSeq 2500 (2)
Nuclear Magnetic Resonance (NMR) (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
Illumina HiSeq 2000 (1)
MicrOTOF II (1)
Orbitrap Exploris 480 (1)
Xevo TQ MS (Waters) (1)
Bruker (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2014 (12)
2021 (11)
2015 (8)
2025 (8)
2022 (7)
2020 (7)
2012 (7)
2011 (6)
2024 (4)
2023 (4)
2017 (4)
2013 (4)
2008 (4)
2010 (3)
2018 (3)
2019 (2)
2016 (2)
2009 (2)
2026 (2)
2007 (1)

CHEBI ID

CHEBI:17295 (4)
CHEBI:42491 (3)
CHEBI:73060 (3)
CHEBI:91299 (3)
CHEBI:17650 (3)
CHEBI:46195 (3)
CHEBI:27732 (3)
CHEBI:73054 (3)
CHEBI:16828 (3)
CHEBI:17368 (3)
CHEBI:18089 (3)
CHEBI:73858 (3)
CHEBI:17775 (3)
CHEBI:16708 (3)
CHEBI:44897 (3)
CHEBI:73134 (3)
CHEBI:16737 (3)
CHEBI:17750 (3)
CHEBI:15354 (3)
CHEBI:16919 (3)
CHEBI:15891 (3)
CHEBI:32816 (3)
CHEBI:7916 (3)
CHEBI:18257 (3)
CHEBI:131440 (2)
CHEBI:91146 (2)
CHEBI:64525|CHEBI:131586 (2)
CHEBI:74669|CHEBI:86330 (2)
CHEBI:64523|CHEBI:131585 (2)
CHEBI:64424|CHEBI:131581 (2)

Metabolite Name

Flavone (3)
Cortisol (3)
Choline (3)
L-Tryptophan (3)
Caffeine (3)
L-Phenylalanine (3)
Ornithine (3)
Creatine (3)
Taurine (3)
Creatinine (3)
PE(16:0/20:4) (2)
Phosphatidylcholine(42:7) (2)
Phosphatidylcholine(40:5) (2)
Sphingomyelin(42:3) (2)
Phosphatidylcholine(40:6) (2)
N-(15Z-tetracosenoyl)-sphinganine-1-phosphocholine (2)
Phosphatidylcholine(38:2) (2)
Phosphatidylcholine(38:3) (2)
Phosphatidylcholine(38:4) (2)
Phosphatidylcholine(38:5)|Phosphoethanolamine(41:5) (2)
Phosphatidylcholine(38:7) (2)
Sphingomyelin(41:2) (2)
Phosphatidylcholine(36:1) (2)
1,2-dioleoyl-sn-glycero-3-phosphocholine|1,2-dipetroselenoyl-sn-glycero-3-phosphocholine (2)
Sphingomyelin(40:2) (2)
Phosphatidylcholine(36:3)|Phosphoethanolamine(39:3) (2)
Phosphatidylcholine(36:5) (2)
Phosphatidylcholine(36:6) (2)
Phosphatidylcholine(34:3)|Phosphoethanolamine(37:3) (2)
Phosphatidylcholine(35:2)|Phosphoethanolamine(38:2) (2)

IsPrivate

False (1)

Modelling Approach

Ordinary differential equation model (1)

Study type

Transcription profiling by array (25)
ChIP-seq (8)
RNA-seq of coding RNA (8)
Methylation profiling by array (3)
Methylation profiling by high throughput sequencing (3)
Unknown experiment type (2)
Comparative genomic hybridization by array (2)
Animal - One-color microarray (1)
Animal - Single-cell sequencing (1)
Human - One-color microarray (1)
Cell line - High-throughput sequencing (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2022 (204)
2021 (196)
2020 (183)
2024 (181)
2023 (173)
2025 (171)
2018 (155)
2019 (144)
2017 (118)
2015 (100)
2016 (96)
2014 (78)
2013 (54)
2012 (50)
2011 (46)
2010 (39)
2026 (39)
2009 (21)
2008 (21)
2007 (8)
2006 (5)
2005 (3)
2001 (3)
2004 (2)
1998 (2)
2002 (1)
2000 (1)
1997 (1)

Lab affiliation

MBG, Aarhus University, Denmark (4)
The Institute of Cancer Research (3)
Aarhus University (2)
Novo Nordisk Foundation Center for Protein Research, Faculty of Health & Medical Sciences, University of Copenhagen, Blegdamsvej 3B, DK-2200 Copenhagen, Denmark (1)
Core Facility for Medical Proteomics and Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen (1)
Department of Microbial Proteomics, Institute of Microbiology, University of Greifswald, Germany (1)
Core Facility for Medical Proteomics and Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen (1)
1.Precision Vaccines Program, Division of Infectious Diseases, Boston Children’s Hospital, Boston, MA, USA. 2. Department of Pediatrics, Harvard Medical School, Boston, MA, USA. (1)
Department of Biochemistry and Molecular Biology; University of Southern Denmark; Odense; 5230; Denmark (1)
Department of Biology University of Copenhagen Denmark (1)
University of Geneva, Department of Microbiology and Molecular Medicine (1)
Laboratory for Biological Mass Spectrometry, Biosciences Institute, Newcastle University, Newcastle-upon-Tyne, NE2 4HH, UK (1)
Professor of Human Molecular Metabolism, dr.med. (MD, Doctor of Medical Science), Chief Research Physician, Specialist in Endocrinology, Herlev-Gentofte University Hospital, Department of Clinical Medicine, and Novo Nordisk Foundation Center for Basic Metabolic Research, Faculty of Health and Medical Science, University of Copenhagen, Copenhagen, Denmark (1)
Department of Biomedicine, Aarhus University, Denmark (1)
Novo Nordisk Foundation Center for Protein Research, Faculty of Health & Medical Sciences, University of Copenhagen, Blegdamsvej 3B, DK-2200 Copenhagen N, Denmark (1)
University of Minnesota (1)
Department of Biomedicine, The University of Bergen, Bergen, Norway (1)
Department of Biochemistry (1)
Department of Biochemistry and Molecular Biology, University of Southern Denmark (1)
Karolinska Institutet (1)
ICR (1)
Helmholtz-Centre for Environmental Research - UFZ Department of Molecular Systems Biology Permoserstrasse 15 04318 Leipzig, Germany (1)
The Institute of Cancer Research, London (1)