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TranscriptomicsUAP56 couples piRNA clusters to the perinuclear transposon silencing machinery [RNA-Seq and RIP-Seq]
The transposon silencing piRNAs are produced from precursors that are encoded by heterochromatic clusters and processed in the perinuclear nuage. We show that the Drosophila nuclear DEAD box protein UAP56, previously implicated in mRNA splicing and nuclear export, co-localizes with the cluster-assoc...
ORGANISM(S): Drosophila melanogaster 
2012-11-28 | E-GEOD-35637 | biostudies-arrayexpress
TranscriptomicsUAP56 couples piRNA clusters to the perinuclear transposon silencing machinery [tiling array]
The transposon silencing piRNAs are produced from precursors that are encoded by heterochromatic clusters and processed in the perinuclear nuage. We show that the Drosophila nuclear DEAD box protein UAP56, previously implicated in mRNA splicing and nuclear export, co-localizes with the cluster-assoc...
ORGANISM(S): Drosophila melanogaster 
2012-11-28 | E-GEOD-35636 | biostudies-arrayexpress
GenomicsLEM-2 ChIP-seq to study chromatin anchoring
Chromatin Immunoprecipitation against the nuclear envelope protein LEM-2 to detect association to the nuclear periphery. LEM-2 ChIP was performed on early embryo fixed extracts for wild-type and two mutants that have altered position of a perinuclear chromatin reporter. LEM-2 ChIP on early embryo ch...
ORGANISM(S): Caenorhabditis elegans 
2015-12-11 | E-GEOD-74133 | biostudies-arrayexpress
GenomicsPerinuclear anchoring of H3K9-methylated chromatin stabilizes induced cell fate
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Caenorhabditis elegans 
2015-12-11 | E-GEOD-74134 | biostudies-arrayexpress
TranscriptomicsHITS-CLIP analysis of Yb binding sites in Drosophila ovary cell line
piRNAs direct Piwi to repress transposons to maintain genome integrity in Drosophila ovarian somatic cells. piRNA maturation and association with Piwi occur at perinuclear Yb bodies, the centers of piRNA biogenesis. Here, we show that piRNA intermediates arising from the piRNA cluster flamenco (flam...
ORGANISM(S): Drosophila melanogaster 
2014-06-24 | E-GEOD-54875 | biostudies-arrayexpress
UnknownA perinuclear microtubule-organizing centre controls nuclear positioning and basement membrane secretion.
Not available
S-EPMC7161059 | biostudies-literature
TranscriptomicsUAP56 couples piRNA clusters to the perinuclear transposon silencing machinery
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Drosophila melanogaster 
2012-11-28 | E-GEOD-35638 | biostudies-arrayexpress
ProteomicsN-glycoproteomics on BC and normal control cell lines
Comprehensive membrane N-glycoproteomics using human breast cancer cell line pairs, Hs578T and Hs578Bst.
ORGANISM(S): Homo Sapiens (human) 
2024-02-16 | PXD040130 | JPOST Repository
UnknownRab35 is translocated from Arf6-positive perinuclear recycling endosomes to neurite tips during neurite outgrowth.
Not available
S-EPMC4114588 | biostudies-literature
UnknownMechanical stimulation induces formin-dependent assembly of a perinuclear actin rim.
Not available
S-EPMC4443368 | biostudies-literature
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