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TranscriptomicsMapping gene expression in two Xenopus: evolutionary constraints and developmental flexibility
Variation in gene expression is known to be important for morphological evolution, however little is known about its general propensity. Here we examine a pair of frogs M-bM-^@M-^S Xenopus laevis and Xenopus tropicalis M-bM-^@M-^S with highly similar embryology, and ask how their transcriptomes comp...
ORGANISM(S): Xenopus laevis 
2011-06-01 | E-GEOD-27227 | biostudies-arrayexpress
TranscriptomicsDroplet barcoding for single cell transcriptomics applied to embryonic stem cells
Recently, RNA sequencing has achieved single cell resolution, but what is limiting is an effective way to routinely isolate and process large numbers of individual cells for in-depth sequencing, and to do so quantitatively. We have developed a droplet-microfluidic approach for parallel barcoding tho...
ORGANISM(S): Homo sapiens 
2015-05-20 | E-GEOD-65525 | biostudies-arrayexpress
TranscriptomicsEffects of temperature on gene expression in coral larvae of Montastraea faveolata
Background Coral reefs are expected to be severely impacted by rising seawater temperatures associated with climate change. This study used cDNA microarrays to investigate transcriptional effects of thermal stress in embryos of the coral Montastraea faveolata. Embryos were exposed to 27.5C, 29.0C, ...
ORGANISM(S): Montastraea faveolata 
2010-05-06 | E-GEOD-15088 | biostudies-arrayexpress
ProteomicsXlaevis - Egg cell, SC (Wuehretal,currbiol,2014)
abundance based on Spectral counting, Interaction consistency score: 1.9, Coverage: 2
ORGANISM(S): 8355 
2014-00-00 | 913028949 | PAXDB
TranscriptomicsOn the relationship of protein and mRNA dynamics in vertebrate embryonic development [RiboZero]
A biochemical explanation of development from the fertilized egg to the adult anatomy requires an understanding of the complement of proteins and RNAs expressed over time during embryogenesis. Here we present a comprehensive characterization of protein and mRNA dynamics across early development in X...
ORGANISM(S): Xenopus laevis 
2015-11-06 | E-GEOD-73904 | biostudies-arrayexpress
TranscriptomicsOn the relationship of protein and mRNA dynamics in vertebrate embryonic development [polyA]
A biochemical explanation of development from the fertilized egg to the adult anatomy requires an understanding of the complement of proteins and RNAs expressed over time during embryogenesis. Here we present a comprehensive characterization of protein and mRNA dynamics across early development in X...
ORGANISM(S): Xenopus laevis 
2015-11-06 | E-GEOD-73870 | biostudies-arrayexpress
TranscriptomicsResveratrol Diet Aging (Heart, Liver, Muscle and Fat Tissue)
Resveratrol delays age-related deterioration and mimics transcriptional aspects of dietary restriction without extending lifespan A small molecule that safely mimics the ability of dietary restriction (DR) to delay age-related diseases in laboratory animals is greatly sought after. We and others ha...
ORGANISM(S): Mus musculus 
2008-08-04 | E-GEOD-11845 | biostudies-arrayexpress
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