Peterson S S - OmicsDI

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Unknown (2942)
Transcriptomics (98)
Proteomics (54)
Genomics (20)
Metabolomics (9)
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Organisms

Mus musculus (46)
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Staphylococcus aureus (7)
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Plasmodium cynomolgi strain B (2)
Ictalurus punctatus x Ictalurus furcatus (1)
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Acidithiobacillus ferrooxidans ATCC 23270 (1)
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Organisms

Sus scrofa (3)
Salvelinus fontinalis (1)

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biostudies-arrayexpress (110)
pride (43)
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CHEBI ID

CHEBI:16015 (6)
CHEBI:17368 (6)
CHEBI:15971 (5)
CHEBI:16414 (5)
CHEBI:16643 (5)
CHEBI:17053 (5)
CHEBI:17895 (5)
CHEBI:18019 (5)
CHEBI:30796 (5)
CHEBI:15729 (4)
CHEBI:15760 (4)
CHEBI:15978 (4)
CHEBI:16027 (4)
CHEBI:16737 (4)
CHEBI:16750 (4)
CHEBI:16857 (4)
CHEBI:17115 (4)
CHEBI:17191 (4)
CHEBI:17203 (4)
CHEBI:17345 (4)
CHEBI:17561 (4)
CHEBI:17596 (4)
CHEBI:17925 (4)
CHEBI:28053 (4)
CHEBI:12936 (3)
CHEBI:14314 (3)
CHEBI:15354 (3)
CHEBI:15414 (3)
CHEBI:15428 (3)
CHEBI:15545 (3)

Metabolite Name

Glycine (3)
Hypoxanthine (3)
L-glutamic acid (3)
Putrescine (3)
Pyruvic acid (3)
Urea (3)
4-guanidinobutyric acid (2)
Adenine (2)
Adenosine (2)
Adenosine-5-monophosphate (2)
Citric acid (2)
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D-glucose-6-phosphate (2)
D-malic acid (2)
Fructose (2)
Fumaric acid (2)
Inositol (2)
L-alanine (2)
L-aspartic acid (2)
L-cysteine (2)
L-histidine (2)
L-homoserine (2)
L-leucine (2)
L-lysine (2)
L-methionine (2)
L-ornithine (2)
L-serine (2)
L-threonine (2)
L-tyrosine (2)
L-valine (2)

First Public Date

2014 (3)
2025 (1)
2021 (1)
2019 (1)
2017 (1)

Modification

Not available (3)
15.994915 (2)
2x(15)N labeled L-lysine (1)
42.010565 (1)
4x(15)N labeled L-arginine (1)
58.005479 (1)

Study type

Transcription profiling by array (75)
ChIP-seq (10)
RNA-seq of coding RNA (6)
Unknown experiment type (4)
Comparative genomic hybridization by array (4)
ChIP-chip by tiling array (3)
Transcription profiling by tiling array (2)
ChIP-chip by array (2)
MicroRNA profiling by array (1)
Methylation profiling by array (1)
Proteomic profiling by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2022 (341)
2023 (275)
2021 (269)
2025 (245)
2024 (240)
2020 (230)
2019 (189)
2018 (179)
2017 (143)
2015 (142)
2016 (137)
2014 (124)
2011 (92)
2013 (87)
2012 (85)
2010 (74)
2009 (44)
2026 (44)
2008 (39)
2007 (22)
2006 (19)
2005 (7)
2003 (6)
2000 (6)
2004 (5)
1999 (4)
2002 (3)
1978 (1)

Lab affiliation

Proteomics (3)
Emory University (2)
1. Department of Biochemistry and Molecular Biology, University of Arkansas for Medical Sciences, Little Rock, AR 2. Arkansas Children's Research Institute (1)
Baylor College of Medicine (1)
Bioinformatic (1)
Center for Infection and Immunity, Mailman School of Public Health, Columbia University Professor of Pathology and Neurology,College of Physicians & Surgeons, Columbia University (1)
Chemical Biology and Proteomics, Biogen 225 Binney Street, Cambridge, MA 02142 United States of America (1)
Department of Biochemistry and Molecular Biology; University of Southern Denmark; Odense; 5230; Denmark (1)
Department of Biomedicine, Aarhus University, Aarhus, Denmark STENO Diabetes Center Aarhus, Aarhus, Denmark (1)
Department of Food Science and Technology, University of Nebraska, Lincoln (1)
Department of Laboratory Medicine and Pathology & Center for Individualized Medicine Mayo Clinic Rochester MN 55905, USA (1)
Department of Laboratory Medicine and Pathology Mayo Clinic, Rochester (1)
Department of Medicine, University of California San Diego, La Jolla, California 92093 (1)
Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Melbourne 3000, Australia (1)
Department of Molecular & Integrative Physiology, University of Michigan Medical School, (1)
Department of Nutritional Sciences and Toxicology University of California, Berkeley (1)
Department of Pathology & Immunology, Washington University, St. Louis, MO 63110 (1)
Department of Pathology and Immunology Bursky Center for Human Immunology and Immunotherapy Programs Washington University in St. Louis 660 S. Euclid Ave, Campus Box 8118 St. Louis, MO 63110 (1)
Department of Pathology and Immunology Washington University School of Medicine St. Louis, MO 63110 (1)
Director, Duke Molecular Physiology Institute, Professor Departments of Medicine (Division of Endocrinology, Metabolism, and Nutrition) and Pharmacology & Cancer Biology Duke University Medical Center (1)
Laboratory Medicine and Pathology Mayo Clinic USA (1)
MPIs for Biophysics and Brain Research (1)
Mayo Clinic (1)
Mayo Clinic, Rochester, USA (1)
Medical University of South Carolina Department of Biochemistry and Molecular Biology,Hollings Cancer Center (1)
PFGRC (1)
Pacific Northwest National Laboratory (1)
PhD (1)
Professor, Department of Laboratory Medicine &Pathology Adjunct Professor, Department of Obstetrics, Gynecology& Women's Health Director, Ovarian Cancer Early Detection Program University of Minnesota Minneapolis, Minnesota, USA (1)
Professor, Deputy Head of Centre Center for Protein Research University of Copenhagen Denmark (1)

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Peptide alarmone signalling triggers an auto-active bacteriocin necessary for genetic competence

The induction of genetic competence is a strategy used by bacteria to increase their genetic repertoire under stressful environmental conditions. Recently, Streptococcus pneumoniae has been shown to co-ordinate the uptake of transforming DNA with fratricide via increased expression of the peptide ph...

ORGANISM(S): Streptococcus mutans UA159

2010-05-29 | E-GEOD-22019 | biostudies-arrayexpress

Salmonella Modulates Metabolism during Growth under Conditions that Induce Expression of Virulence Genes

Salmonella enterica serovar Typhimurium (S. Typhimurium) is a facultative pathogen that uses complex mechanisms to invade and proliferate within mammalian host cells. To investigate possible contributions of metabolic processes to virulence in S. Typhimurium grown under conditions known to induce ex...

2013-05-02 | MTBLS35 | MetaboLights

A Multi-Omic View of Host-Pathogen-Commensal Interplay in Salmonella-Mediated Intestinal Infection

The potential for commensal microorganisms indigenous to a host (the microbiome or microbiota) to alter infection outcome by influencing host-pathogen interplay is largely unknown. We used a multi-omics systems approach, incorporating proteomics, metabolomics, glycomics, and metagenomics, to explore...

2014-06-24 | MTBLS96 | MetaboLights

Structural basis for Parkinson's disease-linked LRRK2's binding to microtubules.

Not available

S-EPMC9758056 | biostudies-literature

Contributions of the Microbiome-Derived Metabolome for Risk Assessment and Prognostication of Pancreatic Cancer