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TranscriptomicsXenopus M-phase extract treated induced pluripotent stem cells
Transfer of somatic cell nuclei to enucleated eggs or ectopic expression of specific transcription factors are two different reprogramming strategies used to generate pluripotent cells from differentiated cells. However, they are poorly efficient and other unknown factors might be required to increa...
ORGANISM(S): Mus musculus 
2011-11-21 | E-GEOD-31691 | biostudies-arrayexpress
TranscriptomicsIFN-M-NM-3-induced iNOS expression in regulatory macrophages prolongs allograft graft survival in fully immunocompetent recipients.
Mouse monocytes exposed to M-CSF and IFN-M-NM-3 were driven to a suppressor phenotype over a seven day culture period. The resulting regulatory macrophages (M regs) expressed markers distinguishing them from M0-, M1-, and M2-polarised macrophages and monocyte-derived DCs. M regs completely suppresse...
ORGANISM(S): Mus musculus 
2013-12-21 | E-GEOD-32690 | biostudies-arrayexpress
MetabolomicsDetermination of Abundant Metabolite Matrix Adducts Illuminates the Dark Metabolome of MALDI-Mass Spectrometry Imaging Datasets
Spatial metabolomics using mass spectrometry imaging (MSI) is a powerful tool to map hundreds to thousands of metabolites in biological systems. One major challenge in MSI is the annotation of m/z values, which is substantially complicated by background ions introduced throughout the c...
2021-06-15 | MTBLS954 | MetaboLights
TranscriptomicsEffect of 17 M-NM-2-estradiol on developing zebrafish embryos
Estrogen signaling is important for vertebrate embryonic development. Here we have used zebrafish (Danio rerio) as a vertebrate model to identify estrogen regulated genes during the first 4 days of development. Zebrafish embryos were exposed to 1 M-BM-5M 17M-NM-2-estradiol from 3 hours post fertiliz...
ORGANISM(S): Danio rerio 
2013-12-31 | E-GEOD-42766 | biostudies-arrayexpress
no omics definedTranscription profiling of M. turncatula treated with ulvan, methyl jasmonate or BTH (salicylic acid analog)
Comparison of M. truncatula responses to ulvan treatment with mM-ithyl jasmonate and BTH (salicylic acid analog).
ORGANISM(S): Medicago truncatula 
2010-01-01 | E-MEXP-1995 | biostudies-arrayexpress
UnknownRisk of Renal Failure Within 10 or 20 Years of Systemic Lupus Erythematosus Diagnosis.
Not available
S-EPMC7572868 | biostudies-literature
MetabolomicsgeoRge: A Computational Tool To Detect the Presence of Stable Isotope Labeling in LC/MS-Based Untargeted Metabolomics
Studying the flow of chemical moieties through the complex set of metabolic reactions that happen in the cell is essential to understanding the alterations in homeostasis that occur in disease. Recently, LC/MS-based untargeted metabolomics and isotopically labeled metabolites have been used to facil...
2015-09-15 | MTBLS213 | MetaboLights
UnknownFuzzy Stochastic Petri Nets for Modeling Biological Systems with Uncertain Kinetic Parameters.
Not available
S-EPMC4766190 | biostudies-literature
TranscriptomicsTranscription profiling of Medicago truncatula responses to Colletotrichum species
We have previously showed a strong genetic determinant governing resistance of the M. truncatula A17 line to C. trifolii is located in a chromosomal region at the top of chromosome 4 (Ameline-torregrosa et al., 2008). This region also contains the RCT1 gene which has been shown to confer resistance ...
ORGANISM(S): Medicago truncatula 
2010-09-01 | E-MEXP-2349 | biostudies-arrayexpress
UnknownPetri net-based model of the human DNA base excision repair pathway.
Not available
S-EPMC6743755 | biostudies-literature
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