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TranscriptomicsIdentification of the miRNA targetome in hippocampal neurons using RIP-seq
We established a neuron-specific Argonaute2:GFP-RNA immunoprecipitation followed by high throughput sequencing (AGO2-RIP-seq) to analyse the regulatory role of miRNAs in mouse hippocampal neurons. Using this technique, we identified more than two thousand miRNA target genes in hippocampal neurons, r...
ORGANISM(S): Mus musculus 
2015-07-31 | E-GEOD-65543 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of E. coli CAUTI strains during biofilm growth in human urine
Gene expression profiling of two different E. coli CAUTI strains during biofilm growth in human urine.
ORGANISM(S): Escherichia coli 
2010-06-09 | E-MEXP-2298 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis Cul3a-1 mutant and control plants during germination in far red light
Parallel germination of Cul3a-1 mutant and control plants in far red light.
ORGANISM(S): Arabidopsis thaliana 
2005-01-01 | E-MEXP-175 | biostudies-arrayexpress
TranscriptomicsDistinct cognitive effects and underlying transcriptome changes upon inhibition of individual miRNAs in hippocampal neurons
MicroRNAs (miRNA) are small, non-coding RNAs mediating post-transcriptional regulation of gene expression. miRNAs have recently been implicated in hippocampus-dependent functions such as learning and memory, although the roles of individual miRNAs in these processes remain largely unknown. Here, we ...
ORGANISM(S): Mus musculus 
2016-03-01 | E-GEOD-68884 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by array of differences between multipotent stromal cells isolated from human bone marrow, umbilical cord blood and placenta
Unrestricted somatic stem cells (USSCs) from human cord blood show distinct differences to multipotent stromal cells isolated from human bone marrow and placenta both at the gene array and functional level. Fibroblast samples and raw data also included in E-TABM-724.
ORGANISM(S): Homo sapiens 
2014-11-26 | E-TABM-880 | biostudies-arrayexpress
MetabolomicsExometabolomic-enabled discovery of compounds associated with Escherichia coli O157:H7 population dynamics in the lettuce phyllosphere

Contamination of fresh produce with human pathogens remains a serious public health and economic concerns due to the absence of effective kill steps in the farm-to-fork chain. In particular, the pathogenic Escherichia coli O157:H7 has been implicated in multiple illness outbreaks linked to lettuc...

2026-06-11 | MTBLS14653 | MetaboLights
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