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To determine gene expression changes during in vitro senescence of MSC we have analyzed differential expression of the corresponding early passage (P2) and senescent passage (PX). There were global changes in the gene expression profile that were reproducible in three independent donor samples. Expe...
ORGANISM(S): Homo sapiens 
Bam files for 124 samples (62 tumor vs blood pairs); Whole Genome Sequencing performed on Illumina HiSeq X Ten
Bam files for 16 meningioma tumor samples; ChIPseq performed on Illumina HiSeq 2000
DNA methylation patterns delineate clinically relevant subgroups of meningioma. We previously established the six meningioma methylation classes (MC) benign-1, 2, 3, intermediate-A, B and malignant. Here, we set out to identify subgroup-specific mutational patterns and pathway regulation. Whole-gen...
release_2: ICGC PedBrain: whole exome sequencing and Target-Seq
release_2: ICGC PedBrain: RNA sequencing
Whole genome bisulfite sequencing of pedbrain - medulloblastoma
4C-seq data was generated for regions of interest to confirm enhancer-gene promoter interactions
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