Phillips W W - OmicsDI

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Unknown (1664)
Transcriptomics (113)
Proteomics (26)
Genomics (25)
Metabolomics (4)
Multiomics (1)
Other (1)

Organisms

Homo sapiens (71)
Mus musculus (35)
Rattus norvegicus (10)
Arabidopsis thaliana (7)
Yersinia pestis (4)
Zea mays (4)
Caenorhabditis remanei (2)
Plasmodium falciparum Dd2 (2)
synthetic construct (2)
Triticum aestivum (2)
Calicophoron daubneyi (2)
Salvia hispanica (1)
Gossypium hirsutum (1)
Aspergillus nidulans (1)
Lolium perenne (1)
Picea abies (1)
Oryza sativa (1)
Hordeum vulgare (1)
Pseudomonas aeruginosa PAO1 (1)
Solanum lycopersicum (1)
Gallus gallus (1)
Saccharomyces cerevisiae (1)
Aepyornis sp. (1)
Anoplocephala perfoliata (1)
Caenorhabditis elegans (1)
Cavia porcellus (1)
Dinosauria (1)
Fasciola hepatica (1)
Mammut americanum (1)
Mullerornis (1)

Organisms

Zea mays (2)

Repository

biostudies-arrayexpress (114)
pride (25)
EGA (20)
MetaboLights (4)
ENA (3)
MassIVE (2)
geo (1)

Tissue

Lung (7)
Liver (3)
Brain (2)
Nasal mucosa (2)
Whole body (2)
Blood plasma (1)
Cell culture (1)
Cell suspension culture (1)
Culture fluid (1)
Eggshell (1)
Epithelial cell (1)
Extracellular vesicle (1)
Pancreas (1)
Stem cell (1)
Urine (1)

Disease

Astrocytoma (1)
Inoculated with P. syringae pv. tomato strain DC3000 + avrRps4 (1)
Colorectal cancer recurrence-free (1)
Squamous cell carcinoma (1)
Barrett's esophagus (1)
Normal (1)
Brain glioblastoma multiforme (1)
Breast cancer (1)
Pancreatic cancer (1)
Parasitic helminthiasis infectious disease (1)
Parasitic infectious disease (1)

Technology Type

Mass Spectrometry (25)
Shotgun proteomics (16)
Gel-based experiment (5)
Bottom-up proteomics (4)
Mass spectrometry (3)
Affymetrix 6.0 (1)
Illumina 1.2M, Affymetrix 6.0 (1)
Illumina HiSeq 2000, Illumina Infinium HumanMethylation450 BeadChip, Affymetrix expression array, ILLUMINA (1)
Mass spectrometry assay (1)
Data-dependent acquisition (1)
DiaPASEF (1)

Instrument Platform

Illumina HiSeq 2500 (3)
Affymetrix GeneChip Scanner 3000 7G (2)
Illumina Genome Analyzer IIx (2)
Scanning hardware (2)
Illumina HiSeq 4000 (2)
Liquid Chromatography MS - positive - reverse phase (2)
418 [Affymetrix] (1)
GenePix 4000B [Axon Instruments] (1)
Illumina HiSeq 2000 (1)
Agilent 7890A GC with 5975C inert XL MSD (1)
Bruker maXis ESI Quadrupole TOF (1)
Agilent 6890 GC/5973N MSD (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2013 (26)
2014 (13)
2008 (12)
2015 (10)
2012 (10)
2010 (9)
2007 (9)
2021 (7)
2020 (6)
2019 (5)
2017 (5)
2016 (5)
2011 (5)
2006 (4)
2024 (3)
2022 (3)
2009 (3)
2026 (3)
2018 (3)
2023 (2)
2025 (2)
2005 (1)

CHEBI ID

CHEBI:15741 (2)
CHEBI:16977 (2)
CHEBI:17151 (2)
CHEBI:17497 (2)
CHEBI:17859 (2)
CHEBI:18089 (2)
CHEBI:18287 (2)
CHEBI:30746 (2)
CHEBI:30768 (2)
CHEBI:30915 (2)
CHEBI:48131 (2)
CHEBI:7916 (2)
CHEBI:10724 (1)
CHEBI:1157 (1)
CHEBI:116314 (1)
CHEBI:125678 (1)
CHEBI:131887 (1)
CHEBI:13248 (1)
CHEBI:132823 (1)
CHEBI:132983 (1)
CHEBI:134076 (1)
CHEBI:134231 (1)
CHEBI:134281 (1)
CHEBI:137160 (1)
CHEBI:137306 (1)
CHEBI:137332 (1)
CHEBI:140928 (1)
CHEBI:141538 (1)
CHEBI:142273 (1)
CHEBI:145244 (1)

Metabolite Name

Glycine (2)
Pantothenic acid (2)
()-2-(2-Furanyl)pyrrolidine (1)
(+)-2,3-Dihydro-3-methyl-1H-pyrrole (1)
(1S,2S,4R,8S)-p-Menthane-1,2,8,9-tetrol 2-glucoside (1)
(2E)-Decenoyl-ACP (1)
(2R)-2-Hydroxy-2-methylbutanenitrile (1)
(2R,3R,4R)-2-Amino-4-hydroxy-3-methylpentanoic acid (1)
(3beta,22R,23R,24S)-3,22,23-Trihydroxystigmastan-6-one (1)
(3beta,4alpha,5alpha,23E)-4-Methylergosta-7,23-dien-3-ol (1)
(3beta,4beta,5alpha)-4-Methylergosta-7,24(28)-dien-3-ol (1)
(3beta,5alpha,6beta,22E,24R)-23-Methylergosta-7,22-diene-3,5,6-triol (1)
(3beta,5alpha,6beta,7alpha,22E,24R)-Ergosta-8,22-diene-3,5,6,7-tetrol (1)
(3beta,5alpha,6beta,9alpha,22E,24R)-23-Methylergosta-7,22-diene-3,5,6,9-tetrol (1)
(E)-5-(3,4,5,6-Tetrahydro-3-pyridylidenemethyl)-2-furanmethanol (1)
(R)-2-Nitro-p-mentha-1,5-diene (1)
(R)-N-Methylsalsolinol (1)
1,2,3,4,5,6-Hexahydro-5-methyl-7H-cyclopenta[b]pyridin-7-one (1)
1,2,3,4,5,6-Hexahydro-7H-cyclopenta[b]pyridin-7-one (1)
1,2,4-triazines (1)
1,3,5-Trihydroxybenzene (1)
1,4-benzodiazepines (1)
1,7-Dimethylguanosine (1)
1-(1-Pyrrolidinyl)-2-propanone (1)
1-(3-Aminopropyl)-4-aminobutanal (1)
1-(9Z-hexadecenoyl)-glycero-3-phosphate (1)
1-(beta-D-Ribofuranosyl)-1,4-dihydronicotinamide (1)
1-Amino-propan-2-ol (1)
1-Ethyl-1H-pyrrole-2-carboxaldehyde (1)
1-Hexanethiol (1)

First Public Date

2014 (2)
2020 (1)

Modification

Not available (2)

Study type

Transcription profiling by array (85)
RNA-seq of coding RNA (11)
Animal - One-color microarray (4)
Comparative genomic hybridization by array (4)
MicroRNA profiling by array (2)
Methylation profiling by array (2)
ChIP-chip by SNP array (1)
Transcription profiling by SAGE (1)
Unknown experiment type (1)
Other (1)
DNA-seq (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2021 (166)
2022 (157)
2024 (151)
2023 (148)
2020 (141)
2025 (135)
2018 (111)
2019 (103)
2015 (90)
2017 (82)
2014 (79)
2013 (78)
2016 (69)
2012 (50)
2011 (47)
2010 (46)
2009 (30)
2026 (30)
2008 (25)
2007 (16)
2006 (8)
2005 (7)
2004 (2)
2003 (2)
1999 (2)
2002 (1)
2001 (1)
2000 (1)

Lab affiliation

Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchâtel, Switzerland (3)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 NeuchÃƒÂ¢tel, Switzerland (part of Philip Morris International group of companies) (2)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchâtel, Switzerland (part of Philip Morris International group of companies) (2)
Signal Transduction (2)
"Philip Morris R&D, Neuchatel, Switzerland" (1)
Aberystwyth University (1)
Brain tumor translational targets German Cancer Research Center (DKFZ) Im Neuenheimer Feld 580 69120 Heidelberg Germany (1)
CCDC CBC (1)
CECAD Institut - University of Cologne Joseph-Stelzmann-Strasse 26 50931 Cologne Germany (1)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (1)
Department of Life Sciences and Systems Biology University of Turin Italy (1)
Departments of Medicine (Oncology) and of Chemical and Systems Biology, Stanford School of Medicine, Stanford, CA, USA Stanford Cancer Institute, Stanford, CA, USA (1)
IBERS, Aberystwyth University (1)
Institute of Biological Environmental and Rural Sciences, Aberystwyth University, Wales UK (1)
Institute of Biological, Environmental & Rural Sciences (IBERS,)Aberystwyth University, Wales, UK. (1)
Institute of Biological, Environmental and Rural Sciences (IBERS), Aberystwyth University, Edward Llwyd Z2.01. (1)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchatel, Switzerland (1)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchatel, Switzerland (part of Philip Morris International group of companies) (1)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 NeuchÃ¢tel, Switzerland (1)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 NeuchÃ¢tel, Switzerland (part of Philip Morris International group of companies) (1)

Tags

xref:PubMed:24494230 (2)
xref:PubMed:18719398 (1)
xref:PubMed:33292867 (1)

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UV-B regulation of microRNAs in maize

Differential expression of microRNAs was studied in maize leaves after an 8-h-exposure under UV-B light. As a control, plants were kept in the greenhouse in the absence of UV-B 4-week maize plants were grown in the greenhouse in the absence of UV-B. Then, they were divided in two groups. One group w...

ORGANISM(S): Zea mays

2013-10-31 | E-GEOD-19768 | biostudies-arrayexpress

Mcl-1 is a key determinant of breast cancer cell survival [expression]

mRNA expression profile of cultured Breast Cancer cell line measured by Affymetrix microarrays Whole genome expression profile of 32 breast cancer cell lines were analyzed with 3 biological replicates.

ORGANISM(S): Homo sapiens

2015-08-07 | E-GEOD-66071 | biostudies-arrayexpress

Mcl-1 is a key determinant of breast cancer cell survival [copy number]

Copy number profile of cultured Breast Cancer cell line measured by Affymetrix SNPs microarrays Whole genome copy number profile of 2 breast cancer cell lines were analyzed using Affymetrix SNP6.0 arrays

ORGANISM(S): Homo sapiens

2015-08-07 | E-GEOD-66070 | biostudies-arrayexpress

Biophysical and kinetic characterization of HemAT, an aerotaxis receptor from Bacillus subtilis.

Not available

S-EPMC1305375 | biostudies-literature

Identification of light-regulated genes in Aspergillus nidulans

Light is a major environmental signal regulating many different biological processes. In Aspergillus nidulans light controls asexual and sexual development as well as the production of secondary metabolites. In order to get a global view of genes regulated during asexual development and of genes inv...

ORGANISM(S): Aspergillus nidulans

2011-06-06 | E-MEXP-3218 | biostudies-arrayexpress

Microarray comparison of RNAi chc101 and mbd101 transgenic plants and non transgenic siblings after UV-B exposure

Mutant maize lines expressing RNAi gene silencing constructs directed to two distinct classes of chromatin associated proteins show heightened sensitivity to UV-B including sunburned necrosis and down regulation of chromatin genes (Casati and Walbot, 2006). We have available transgenic maize express...

ORGANISM(S): Zea mays

2008-12-31 | GSE10400 | GEO

Ultrasharp nonlinear photothermal and photoacoustic resonances and holes beyond the spectral limit.

Not available

S-EPMC4282491 | biostudies-literature

Achieving polydispersive HDPE by N,N,N-Co precatalysts appended with N-2,4-bis(di(4-methoxyphenyl)methyl)-6-methylphenyl.

Not available

S-EPMC9058363 | biostudies-literature

Nonlinear photoacoustic signal amplification from single targets in absorption background.

Not available

S-EPMC4048727 | biostudies-literature

Transient regulation of transport by pericytes in venular microvessels via trapped microdomains.