Sort   by:  
 Page size 
ProteomicsTemporal dynamics and metagenomics of phosphorothioate epigenomes in the human gut microbiome
Epigenetic regulation of gene expression and host defense is well established in microbial communities, with dozens of DNA modifications comprising the epigenomes of prokaryotes and bacteriophage. Phosphorothioation (PT) of DNA, in which a chemically-reactive sulfur atom replaces a non-bridging oxyg...
ORGANISM(S): Escherichia coli 
2025-03-03 | PXD051389 | Pride
Lc-ms/ms Phosphorothioate epigenetic modification Human gut microbiome Mouse gut microbiome 
UnknownEpigenetic competition reveals density-dependent regulation and target site plasticity of phosphorothioate epigenetics in bacteria.
Not available
S-EPMC7322087 | biostudies-literature
GenomicsDefinition of global transcriptional variation in wild type Pseudomonas fluorescens Pf0-1 and its phosphorothioate modification (PT) deficient mutant by RNA-seq analysis
Definition of global transcriptional variation in wild type Pseudomonas fluorescens Pf0-1 and its phosphorothioate modification (PT) deficient mutant by RNA-seq analysis
PRJNA433851 | ENA
UnknownNicking mechanism underlying the DNA phosphorothioate-sensing antiphage defense by SspE.
Not available
S-EPMC9646914 | biostudies-literature
UnknownOccurrence, evolution, and functions of DNA phosphorothioate epigenetics in bacteria.
Not available
S-EPMC5879708 | biostudies-literature
UnknownSspABCD-SspFGH Constitutes a New Type of DNA Phosphorothioate-Based Bacterial Defense System.
Not available
S-EPMC8092258 | biostudies-literature
UnknownPT-seq: A method for metagenomic analysis of phosphorothioate epigenetics in complex microbial communities.
Not available
S-EPMC11185561 | biostudies-literature
TranscriptomicsDefinition of global transcriptional variation in wild type Pseudomonas fluorescens Pf0-1 and its phosphorothioate modification (PT) deficient mutant by RNA-seq analysis
To determine whether PT modifications are involved in the epigenetic control of specific genes, RNA-seq analysis was conducted to define global transcriptional changes in early log-phase cultures of wild-type pf0-1 and the PT modifacation related genes(dndBCDE) deletion mutant TT-5. Compared with wi...
ORGANISM(S): Pseudomonas fluorescens 
2018-02-15 | GSE110489 | GEO
UnknownThe origin and impeded dissemination of the DNA phosphorothioation system in prokaryotes.
Not available
S-EPMC8569181 | biostudies-literature
UnknownInvolvement of the DNA Phosphorothioation System in TorR Binding and Anaerobic TMAO Respiration in Salmonella enterica.
Not available
S-EPMC9239176 | biostudies-literature
Sort   by:  
 Page size