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MetabolomicsNatural photosynthetic system for restoring homeostasis of animal organelle interaction network

Disruption of organelle interactions due to metabolic stress is a crucial factor in the pathological processes of many degenerative diseases. Current treatments usually focus on individual organelles while ignoring the role of organelle interactions in cell damage caused by cascade reactions. The...

2026-01-20 | MTBLS13730 | MetaboLights
TranscriptomicsExploring the mechanism of C4 photosynthetic differentiation through a unified comparative analysis of maize and rice leaf transcriptomes
Maize and rice are the two most economically important grass crops and utilize distinct forms of photosynthesis to fix carbon: C4 and C3 respectively. Relative to C3 photosynthesis, C4 photosynthesis reduces photorespiration and affords higher water and nitrogen use efficiencies under hot arid condi...
ORGANISM(S): Zea mays 
2014-10-12 | E-GEOD-54274 | biostudies-arrayexpress
TranscriptomicsComparative physiology and transcriptional networks underlying the heat shock response in Populus trichocarpa, Arabidopsis thaliana and Glycine max [Arabidopsis]
The heat shock response continues to be layered with additional complexity as interactions and cross-talk among heat shock proteins, the reactive oxygen network and hormonal signaling are discovered. However, comparative analyses exploring variation in each of these processes among species remains r...
ORGANISM(S): Arabidopsis thaliana 
2011-04-01 | E-GEOD-26197 | biostudies-arrayexpress
TranscriptomicsArabidopsis thaliana strain:Col-0Transcriptome or Gene expression
When grown under phosphate (Pi) deficiency, plants adjust their developmental program and metabolic activity to cope with this nutritional stress. For Arabidopsis, the developmental responses include inhibition of primary root growth and enhanced formation of lateral roots and root hairs. Pi deficie...
ORGANISM(S): Arabidopsis thaliana 
2014-07-28 | E-MTAB-4405 | biostudies-arrayexpress
TranscriptomicsRNA seq of different species of Salsoleae with different photosynthetic types
Cotyledons and leaf transcriptomes of species of Salsoleae with different photosynthetic types were de novo assembled and analyzed to provide a better understanding of differential gene expression between C3, C2 and C4 species. Total RNA of cotyledons and leaves of different species of Salsoleae wi...
ORGANISM(S): Salsola webbii 
2017-12-29 | E-MTAB-5778 | biostudies-arrayexpress
ProteomicsPhosphoproteomics of Marchantia polymorpha upon Blue light and DCMU treatments
To optimize growth and development, plants monitor photosynthetic activities and regulate various cellular processes accordingly. However, signaling mechanisms that coordinate plant growth with photosynthesis remain poorly understood. To identify factors that are involved in this coordination, we pe...
ORGANISM(S): Marchantia Polymorpha Subsp. Ruderalis 
2020-01-15 | PXD015796 | JPOST Repository
GenomicsRNA seq of different species of Salsoleae with different photosynthetic types
RNA seq of different species of Salsoleae with different photosynthetic types
PRJEB22023 | ENA
GenomicsGenome-wide maps of histone modifications in Arabidopsis thaliana
Histone acetylation and methylation regulate gene expression in eukaryotes, but their effects on the transcriptome of a multicellular organism and on the transcriptomic divergence between species are still poorly understood. Here we present the first genome-wide 1-bp resolution maps of histone acety...
ORGANISM(S): Arabidopsis thaliana 
2011-02-02 | E-GEOD-22276 | biostudies-arrayexpress
TranscriptomicsComparative physiology and transcriptional networks underlying the heat shock response in Populus trichocarpa, Arabidopsis thaliana and Glycine max [Populus]
The heat shock response continues to be layered with additional complexity as interactions and cross-talk among heat shock proteins, the reactive oxygen network and hormonal signaling are discovered. However, comparative analyses exploring variation in each of these processes among species remains r...
ORGANISM(S): Populus trichocarpa 
2011-04-01 | E-GEOD-26195 | biostudies-arrayexpress
TranscriptomicsComparative physiology and transcriptional networks underlying the heat shock response in Populus trichocarpa, Arabidopsis thaliana and Glycine max [Soy]
The heat shock response continues to be layered with additional complexity as interactions and cross-talk among heat shock proteins, the reactive oxygen network and hormonal signaling are discovered. However, comparative analyses exploring variation in each of these processes among species remains r...
ORGANISM(S): Glycine max 
2011-04-01 | E-GEOD-26198 | biostudies-arrayexpress
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