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TranscriptomicsRNA-Seq Based Reconstruction of the Phylogenetic Tree of the Genus Flaveria (Asteraceae)
The genus Flaveria has been extensively used as a model to study the evolution of C4 photosynthesis as it contains both C3 and C4 species as well as a number of species that exhibit intermediate types of photosynthesis. The current phylogenetic tree of the Flaveria genus contains 21 of the 23 known ...
ORGANISM(S): Flaveria cronquistii 
2015-01-08 | E-GEOD-54339 | biostudies-arrayexpress
TranscriptomicsPhylogenetic, microbiological and glycoside hydrolase diversities within the extremely thermophilic, plant biomass-degrading genus Caldicellulosiruptor
Phylogenetic, microbiological and comparative genomic analysis was used to examine the diversity among members of the genus Caldicellulosiruptor with an eye towards the capacity of these extremely thermophilic bacteria for degrading the complex carbohydrate content of plant biomass. Seven species fr...
ORGANISM(S): Caldicellulosiruptor lactoaceticus 
2010-11-29 | E-GEOD-23606 | biostudies-arrayexpress
GenomicsPhylogenetic reconstruction of breast cancer
The aim of this study was to identify the evolutionary trajectories of metastatic breast cancer. We present whole genome sequencing data (primary tumours, axillary lymph nodes, distant metastasis and matched normal tissues) from 16 breast cancer patients. This work sheds light on the routes on which...
EGAS00001004356 | EGA
ProteomicsA phylogenetic and proteomic reconstruction of eukaryotic chromatin evolution
Histones and associated chromatin proteins have essential functions in eukaryotic genome organization and regulation. Despite this fundamental role in eukaryotic cell biology, we lack a phylogenetically-comprehensive understanding of chromatin evolution. Here, we combine comparative proteomics and g...
ORGANISM(S): Acanthamoeba castellanii Sycon ciliatum Phytophthora infestans Thecamonas trahens Dictyostelium discoideum (Slime mold) Chlamydomonas reinhardtii Physcomitrella Nitrososphaera viennensis Bigelowiella natans Homo sapiens (Human) Methanobrevibacter cuticularis Gefionella okellyi Corallochytrium limacisporum Guillardia theta Naegleria gruberi Capsaspora owczarzaki Emiliania huxleyi Spizellomyces punctatus Methanospirillum stamsii Thalassiosira pseudonana Fabomonas tropica 
2022-08-12 | PXD031991 | Pride
Proteogenomics Histones Evolution Chromatin 
TranscriptomicsRNA-Seq Based Reconstruction of the Phylogenetic Tree of the Genus Flaveria (Asteraceae)
The genus Flaveria has been extensively used as a model to study the evolution of C4 photosynthesis as it contains both C3 and C4 species as well as a number of species that exhibit intermediate types of photosynthesis. The current phylogenetic tree of the Flaveria genus contains 21 of the 23 known ...
ORGANISM(S): Flaveria cronquistii Helenium autumnale Flaveria kochiana Flaveria sonorensis Flaveria bidentis Flaveria pubescens Tragopogon dubius Tanacetum parthenium Flaveria angustifolia Flaveria pringlei Flaveria trinervia Flaveria brownii Flaveria palmeri Flaveria vaginata 
2015-01-08 | GSE54339 | GEO
GenomicsRNA-Seq Based Reconstruction of the Phylogenetic Tree of the Genus Flaveria (Asteraceae)
RNA-Seq Based Reconstruction of the Phylogenetic Tree of the Genus Flaveria (Asteraceae)
PRJNA236235 | ENA
GenomicsReconstruction of human phylogenetic trees using single-cell genome sequencing
The trillions of cells that constitute the human body are developed from a fertilized egg through embryogenesis. However, cellular dynamics and developmental outcomes of embryonic cells remain to be largely unknown due to the technical and ethical challenges. Here we sequenced whole-genomes single-c...
EGAS00001004824 | EGA
Genomics
GBS PHYLOGENETIC RECONSTRUCTION OF HELIANTHEMUM
PRJNA573639 | ENA
GenomicsWithin-host diversity improves phylogenetic reconstruction of SARS-CoV-2 outbreaks
Within-host diversity improves phylogenetic reconstruction of SARS-CoV-2 outbreaks
PRJEB53224 | ENA
ProteomicsPalaeoproteomic analysis of Pleistocene cave hyenas from east Asia
Spotted hyena (Crocuta crocuta) is the only extant species of the genus Crocuta, which once occupied a much wider range during the Pliocene and Pleistocene. However, its origin and evolutionary history is somewhat contentious due to discordances being found between morphological, nuclear, and mitoch...
ORGANISM(S): Crocuta 
2020-10-19 | PXD020530 | Pride
Northern china Cave hyenas Palaeoproteomics Phylogenetic reconstruction 
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