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TranscriptomicsGermination of Leafy Spurge (Euphorbia esula) Seeds under Constant and Alternating Temperature
Transcriptome changes were investigated for Euphorbia esula (leafy spurge) seeds with a focus on the effect of constant and diurnal fluctuating temperature on dormancy and germination. Leafy spurge seeds do not germinate when incubated for 21 days at 20°C constant temperatures, but nearly 30% germin...
ORGANISM(S): Euphorbia esula 
2010-06-01 | E-GEOD-18533 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of pigmented and non-pigmented tubers of Solanum tuberosum
Transcriptional analysis of pigmented and non-pigmented potato tuber flesh using POCI 44k microarrays
ORGANISM(S): Solanum tuberosum 
2010-01-01 | E-TABM-787 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of pigmented and non-pigmented tubers of Solanum tuberosum
Transcriptional analysis of pigmented and non-pigmented potato tuber flesh using POCI 44k microarrays
ORGANISM(S): Solanum tuberosum 
2010-01-01 | E-TABM-788 | biostudies-arrayexpress
ProteomicsSWATH-based quantitative proteomics data derived from whole grain of Malaysian local pigmented and non-pigmented rice varieties
Information about protein expression in rice grain across both pigmented and non-pigmented rice varieties is still relatively scarce. The data provided here represent proteomic data obtained from selected 6 Malaysian local rice varieties with varying pigmentations (black, red and white). The selecte...
ORGANISM(S): Oryza sativa (Rice) 
2020-04-27 | PXD018338 | Pride
Oryza sativa indica  pigmented rice  non-pigmented rice  nutritional traits  swath-ms. 
ProteomicsProteome profiling highlights mechanisms underlying pigment and tocopherol accumulation in red and black rice seeds
Rice is a major component of the human diet and feeds more than 50 million people across the globe. Therefore, efforts are being made to improve the nutritional quality of rice seeds in order to make a super-rice cultivar rich in antioxidants and vitamins. We previously developed two rice cultivars,...
ORGANISM(S): Oryza sativa (Rice) 
2023-09-21 | PXD039588 | Pride
Pigmented seeds Proteomics Seeds Rice 
TranscriptomicsIdentifying conserved and novel miRNAs in developing seeds of Brassica napus using deep sequencing [mRNA-seq]
MicroRNAs (miRNAs) are important post-transcriptional regulators of plant development and seed formation. In Brassica napus, an important edible oil crop, valuable lipids are synthesized and stored in specific seed tissues during embryogenesis. The miRNA transcriptome of B. napus is currently poorly...
ORGANISM(S): Brassica napus 
2014-08-01 | E-GEOD-38018 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis seed compartments at the pre-globular stage
We collected pre-globular stage seed compartments from 7-micron paraffin sections using the Leica LMD6000 system in order to identify the mRNAs present in different compartments of seeds containing pre-globular-stage embryos was identified as those seeds containing embryo propers made up of between...
ORGANISM(S): Arabidopsis thaliana 
2008-10-21 | E-GEOD-12402 | biostudies-arrayexpress
TranscriptomicsMicroarray data from pre-germinated seeds and hypoxia-treated seedlings of Arabidopsis prt6-1 and ate1 ate2 mutants of the N-end rule pathway of targeted proteolysis pathway
This study analyzes transcriptome profiles in pre-germinated seeds and hypoxia-treated seedlings of Arabidopsis thaliana wild type (Col-0) and homozygous mutants (prt6-1 and ate1 ate2). This dataset includes CEL files, RMA signal values and MAS5 P/M/A calls. For pre-germinated seeds, seeds imbibed f...
ORGANISM(S): Arabidopsis thaliana 
2011-10-22 | E-GEOD-29941 | biostudies-arrayexpress
UnknownCombined mass spectrometry-based metabolite profiling of different pigmented rice (Oryza sativa L.) seeds and correlation with antioxidant activities.
Not available
S-EPMC6271636 | biostudies-literature
TranscriptomicsTranscriptome profiling of wheat seedlings following treatment with ultra-high diluted Arsenicum trioxide
A recently developed plant model [Betti et al., 2010 TheScientificWorldJOURNAL, 10, 2330M-^V2347] was used for identifying differentially expressed genes associated with plant response to ultra-high diluted (beyond the Avogadro limit) treatments. Seeds of common wheat (Triticum aestivum L.), previou...
ORGANISM(S): Triticum aestivum 
2015-03-12 | E-MEXP-3666 | biostudies-arrayexpress
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