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OtherSystems-based analysis of Arabidopsis leaf growth reveals adaptation to water deficit.
PRIDE ID: 21331, ae1_5: PE47_1, PE48_1, PE5_4, PE6_4, PE7_4, PE8_4, control_25, control_26. Data published as part of Mol Syst Biol. 2012, 8:606 . From the Abstract: {{i}} ... To reveal the dynamic systems behaviour of leaf development, we profiled Arabidopsis leaf number six in depth at four diffe...
ORGANISM(S): Thale_cress 
GPM11210004321 | GPMDB
Resource Reanalysis 
TranscriptomicsThe time-series gene expression data in PMA stimulated THP-1
(1) qPCR Gene Expression Data The THP-1 cell line was sub-cloned and one clone (#5) was selected for its ability to differentiate relatively homogeneously in response to phorbol 12-myristate-13-acetate (PMA) (Sigma). THP-1.5 was used for all subsequent experiments. THP-1.5 cells were cultured in ...
ORGANISM(S): Homo sapiens 
2010-06-19 | E-GEOD-15528 | biostudies-arrayexpress
MetabolomicshRUV: Hierarchical approach to removal of unwanted variation for large-scale metabolomics data
Liquid chromatography-mass spectrometry-based metabolomics studies are increasingly applied to large population cohorts, which run for several weeks or even years in data acquisition. This inevitably introduces unwanted intra- and inter-batch variations over time that can overshadow true biological ...
2021-07-05 | MTBLS2483 | MetaboLights
TranscriptomicsCustom MHC array analysis of lymphoblastoid cell lines
The human MHC is a paradigm for genomics, showing striking association with disease but functional variants remain largely unresolved. Using an original hybrid microarray (containing tiling and junction probes) for the MHC and accounting for known sequence diversity, we have drawn the first high-res...
ORGANISM(S): Homo sapiens 
2011-05-23 | E-GEOD-22453 | biostudies-arrayexpress
GenomicsGoT2D: Genetics of Type 2 Diabetes, a study of the the genetic architecture of type 2 diabetes using low pass whole genome sequencing and high density SNP genotyping in 2,657 individuals.
The Genetics of Type 2 Diabetes Consortium (GoT2D) is a collaboration between the University of Michigan, the Broad Institute and the Wellcome Trust Centre for Human Genetics. The overall aim is to extend upon recent efforts, such as genome-wide association studies (GWAS) and large scale meta-analys...
EGAS00001001459 | EGA
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