Plant Robert L RL

Show results for

Unknown (17)
Transcriptomics (13)
Proteomics (11)
Metabolomics (6)
Genomics (3)

Organisms

Homo sapiens (8)
Arabidopsis thaliana (3)
Mus musculus (3)
Danio rerio (2)
Oryza sativa (1)
Labeo rohita (1)

Repository

biostudies-arrayexpress (16)
MassIVE (8)
MetaboLights (5)
GNPS (1)
PanoramaPublic (1)
PAXDB (1)
pride (1)

Tissue

Feces (1)

Technology Type

Mass spectrometry (5)
Mass Spectrometry (1)
Shotgun proteomics (1)

Instrument Platform

LTQ XL (2)
LTQ Orbitrap Elite (2)
Orbitrap Fusion Lumos (2)
Q Exactive Plus (2)
5975C Series GC/MSD (Agilent) (2)
Gas Chromatography MS - positive (2)
LTQ Orbitrap Velos (1)
Q Exactive HF (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)

Publication Date

2015 (3)
2014 (3)
2013 (3)
2012 (3)
2022 (3)
2018 (3)
2021 (3)
2011 (2)
2017 (2)
2009 (1)
2008 (1)
2023 (1)
2019 (1)
2010 (1)

UNIPROT ID/AC

14310_SOLLC (1)
14331_SOLLC (1)
14332_SOLLC (1)
14333_SOLLC (1)
14334_SOLLC (1)
14335_SOLLC (1)
14336_SOLLC (1)
14337_SOLLC (1)
14338_SOLLC (1)
14339_SOLLC (1)
4081.Solyc00g017210.1.1 (1)
4081.Solyc00g036540.1.1 (1)
4081.Solyc00g042140.1.1 (1)
4081.Solyc01g006980.2.1 (1)
4081.Solyc01g008090.2.1 (1)
4081.Solyc01g008330.2.1 (1)
4081.Solyc01g008410.1.1 (1)
4081.Solyc01g010580.2.1 (1)
4081.Solyc01g012700.2.1 (1)
4081.Solyc01g016990.1.1 (1)
4081.Solyc01g059760.1.1 (1)
4081.Solyc01g066700.2.1 (1)
4081.Solyc01g068020.2.1 (1)
4081.Solyc01g074000.2.1 (1)
4081.Solyc01g080600.2.1 (1)
4081.Solyc01g081180.1.1 (1)
4081.Solyc01g086800.2.1 (1)
4081.Solyc01g086820.2.1 (1)
4081.Solyc01g087710.2.1 (1)
4081.Solyc01g088410.2.1 (1)

CHEBI ID

CHEBI:15741 (4)
CHEBI:15756 (4)
CHEBI:18237 (4)
CHEBI:22660 (4)
CHEBI:26986 (4)
CHEBI:27266 (4)
CHEBI:28044 (4)
CHEBI:28842 (4)
CHEBI:33508 (4)
CHEBI:6650 (4)
CHEBI:17234 (3)
CHEBI:17268 (3)
CHEBI:17351 (3)
CHEBI:17754 (3)
CHEBI:17822 (3)
CHEBI:17992 (3)
CHEBI:18012 (3)
CHEBI:18186 (3)
CHEBI:22653 (3)
CHEBI:24898 (3)
CHEBI:26078 (3)
CHEBI:27432 (3)
CHEBI:27693 (3)
CHEBI:27897 (3)
CHEBI:28300 (3)
CHEBI:28757 (3)
CHEBI:30769 (3)
CHEBI:14336 (2)
CHEBI:15428 (2)
CHEBI:15963 (2)

Metabolite Name

5-oxo-proline (2)
Asparagine (2)
Aspartic acid (2)
Aspartic acid (2)
Citric acid (2)
Fumaric acid (2)
Glucose (2)
Glutamic acid (2)
Glutamic acid (2)
Glutamine (2)
Glyceric acid (2)
Glycerol (2)
Isoleucine (2)
Linoleic acid (2)
Lysine (2)
Malic acid (2)
Methionine (2)
Myo-inositol (2)
Palmitic acid (2)
Phenylalanine (2)
Phenylalanine (2)
Proline (2)
Serine (2)
Stearic acid (2)
Succinic acid (2)
Threonic acid (2)
Threonine (2)
Threonine (2)
Tyrosine (2)
Valine (2)

Study type

Transcription profiling by array (10)
ChIP-seq (2)
RNA-seq of coding RNA (2)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2015 (3)
2014 (3)
2013 (3)
2012 (3)
2021 (3)
2016 (3)
2011 (2)
2025 (2)
2023 (2)
2022 (2)
2020 (2)
2018 (2)
2009 (1)
2008 (1)
2019 (1)

Lab affiliation

Institute for Systems Biology (1)

Previous page
1 / 5
You're on page 1
page 2
page 3
page 4
page 5
Next page

Sort by:

Relevance

Page size

Transcript, protein and metabolite temporal dynamics in the CAM plant Agave

Already a proven mechanism for drought sustainability, crassulacean acid metabolism (CAM) is a specialized type of photosynthesis that maximizes water-use efficiency (WUE) via an inverse (compared to C3 and C4 photosynthesis-performing species) day/night pattern of stomatal closure/opening to shift ...

2017-10-13 | MTBLS363 | MetaboLights

Bioinspired Rhamnolipid Protects Wheat Against Zymoseptoria tritici Through Mainly Direct Antifungal Activity and Without Major Impact on Leaf Physiology

Rhamnolipids (RLs), glycolipids biosynthesized by the Pseudomonas and Burkholderia genera, are known to display various activities against a wide range of pathogens. Most previous studies on RLs focused on their direct antimicrobial activity, while only a few reports described t...

2022-06-21 | MTBLS4542 | MetaboLights

Towards engineering ectomycorrhization into switchgrass bioenergy crops via a lectin receptor-like kinase

Soil-borne microbes can establish compatible relationships with host plants, providing a large variety of nutritive and protective compounds in exchange for photosynthesized sugars. However, the molecular mechanisms mediating the establishment of these beneficial relationships remain unclear. Our pr...

2021-08-11 | MTBLS2597 | MetaboLights

Mining waste streams of food production for bioactive plant polysaccharides that affect the fitness and expressed activities of targeted human gut microbes

ORGANISM(S): Microbiota (ncbitaxon:13613) Mus Musculus (ncbitaxon:10090)

2018-04-18 | MSV000082287 | MassIVE

Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance

The development of reliable, mixed-culture biotechnological processes hinges on understanding how microbial ecosystems respond to disturbances. Here we reveal extensive phenotypic plasticity and niche complementarity in oleaginous microbial populations from a biological wastewater treatment plant. W...

2021-04-06 | MTBLS2021 | MetaboLights

Bioinspired Rhamnolipid Protects Wheat Against Zymoseptoria tritici Through Mainly Direct Antifungal Activity and Without Major Impact on Leaf Physiology.

Not available

S-EPMC9204090 | biostudies-literature

Imprinted expression of genes and small RNA is triggered by localized demethylation of the maternal genome in rice endosperm

We report that rice endosperm shows a specific hypomethylation of DNA in the maternal genome, preferring regions of high DNA accessibility. Maternally expressed imprinted genes are enriched for hypomethylation at putative promoter regions and transcriptional termini, and paternally expressed genes a...

ORGANISM(S): Oryza sativa

2013-05-01 | E-GEOD-44898 | biostudies-arrayexpress

A common registration-to-publication automated pipeline for nomenclatural acts for higher plants (International Plant Names Index, IPNI), fungi (Index Fungorum, MycoBank) and animals (ZooBank).

Not available

S-EPMC4741224 | biostudies-literature

Extensive imprinted gene expression in Arabidopsis endosperm

Some flowering plant and vertebrate genes are expressed primarily or exclusively from either the maternal or paternal allele, a phenomenon called genomic imprinting. Flowering plant imprinted gene expression has been described primarily in endosperm, a terminal nutritive tissue consumed by the embry...

ORGANISM(S): Arabidopsis thaliana

2011-03-10 | E-GEOD-24644 | biostudies-arrayexpress

BCAA catabolic mutants in prolonged darkness

We used RNA-Seq to ask whether the transcripts for the proposed BCKDH subunits are upregulated in wild-type plants subjected to prolonged darkness. These experiments were performed using rosette leaves from 5-week-old, short-day-grown (8h light/16h dark) Col-0 wild-type plants moved to constant dark...