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MetabolomicsDecoding the Human Gut Bacterial Plasmids in Colorectal Cancer
Gut plasmids show heightened sensitivity to gut microenvironmental changes compared to their bacterial hosts. To explore their significance in colorectal cancer (CRC), we analyzed metagenomic data from 863 participants (312 CRC, 387 high-risk, 164 low-risk). Plasmid and bacterial profiles were chara...
2026-04-26 | MTBLS14376 | MetaboLights
MetabolomicsDecoding the Human Gut Bacterial Plasmids in Colorectal Cancer
Gut plasmids show heightened sensitivity to gut microenvironmental changes compared to their bacterial hosts. To explore their significance in colorectal cancer (CRC), we analyzed metagenomic data from 863 participants (312 CRC, 387 high-risk, 164 low-risk). Plasmid and bacterial profiles were chara...
2026-04-24 | MTBLS14358 | MetaboLights
TranscriptomicsComplexity of expression from transiently transfected plasmids
Transient plasmid transfection is common approach for studies in cultured mammalian cells. To examine behavior of transfected plasmids, we analyzed their transcriptional landscape by deep sequencing. We found that plasmids generate different levels of transcripts virtually everywhere. Spurious trans...
ORGANISM(S): Homo sapiens 
2012-08-17 | E-GEOD-36062 | biostudies-arrayexpress
Genomicssynthetic plasmids
synthetic plasmids
PRJEB107757 | ENA
TranscriptomicsTranscription profiling of Salmonella enterica serotype SL1344 wildtype, pSf-R27sfh and pSf-R27 at stationary and exponential growth phases, to investigate the role of the Sfh protein encoded by transmissible plasmids and involved in human typhoid
The Sfh protein is encoded by self-transmissible plasmids involved in human typhoid and is closely related to the global regulator H-NS. We have found that Sfh provides a stealth function that allows the plasmids to be transmitted to new bacterial hosts with minimal effects on their fitness. Introdu...
ORGANISM(S): Salmonella enterica serotype Typhimurium 
2007-01-15 | E-SGRP-7 | biostudies-arrayexpress
GenomicsPlasmids containing blaOXA-48
Plasmids containing blaOXA-48
PRJEB88520 | ENA
GenomicsAeromonas salmonicida plasmids survey
Aeromonas salmonicida plasmids survey
PRJEB44482 | ENA
GenomicsEnvironmental Plasmids
Environmental AR Plasmids - Genome Sequencing and Assembly
PRJNA428773 | ENA
ProteomicsTMT-based Study of Gene Expression Changes in Escherichia coli in Presence of Plasmids
The plasmids introduced into the E. coli cells affect the expression of chromosomal genes. Therefore we aimed at comparing the protein expression profiles of a strain not containing any plasmid with strains that do carry plasmids.
ORGANISM(S): Escherichia coli 
2021-12-14 | PXD014039 | Pride
Escherichia coli Tmt Tandem mass tag Plasmid 
GenomicsResistance Plasmids in Salmonella Pullorum
Resistance Plasmids in Salmonella Pullorum
PRJEB28617 | ENA
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