Post-transcriptional regulations

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Transcriptomics (168)
Unknown (152)
Genomics (88)
Proteomics (80)
Metabolomics (14)
Models (4)
Multiomics (2)
Methylation profiling (2)
Other (2)

Organisms

Homo sapiens (48)
Arabidopsis thaliana (46)
Mus musculus (43)
Caenorhabditis elegans (12)
Rattus norvegicus (9)
Drosophila melanogaster (7)
Saccharomyces cerevisiae (6)
Danio rerio (5)
Equus caballus (4)
Escherichia coli (3)
Zea mays (3)
Eukaryota (2)
Eugenia uniflora (2)
Schizosaccharomyces pombe (2)
Capra hircus (2)
Populus trichocarpa (2)
Glycine max (2)
Escherichia coli K-12 (2)
Leishmania infantum (1)
Escherichia coli O157:H7 (1)
Leishmania donovani (1)
Phaeodactylum tricornutum (1)
Legionella pneumophila (1)
Cyprinus carpio (1)
Schistosoma mansoni (1)
Citrus sinensis (1)
Bordetella pertussis (1)
Oryza sativa Japonica Group (1)
Gallus gallus (1)
Sus scrofa (1)

Organisms

Homo sapiens (19)
Mus musculus (12)
Arabidopsis thaliana (5)
Rattus norvegicus (4)
Zea mays (2)
Equus caballus (2)
Escherichia coli str. K-12 substr. MG1655 (2)
Danio rerio (2)
Craterostigma plantagineum (1)
Manihot esculenta subsp. esculenta (1)
Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 (1)
Locusta migratoria (1)
Fusarium fujikuroi (1)
Populus trichocarpa (1)
Lactuca sativa (1)
Capra hircus (1)
Escherichia coli (1)
Hordeum vulgare (1)
Drosophila melanogaster (1)
Gossypium hirsutum (1)

Repository

biostudies-arrayexpress (141)
ENA (68)
geo (49)
MassIVE (35)
MetaboLights (14)
pride (12)
iProX (11)
jPOST (9)
PeptideAtlas (8)
BioModels (3)
PanoramaPublic (3)
EGA (2)
PAXDB (2)
Cell Collective (1)

Tissue

HeLa cell (3)
Epithelial cell (3)
Cell culture (2)
Others (1)
Muscle stem cell (1)
Epididymal white adipose tissue (1)
Photosynthetic cell (1)
Skeletal muscle satellite cell (1)
Skeletal muscle (1)
Stem cell (1)
Leaf (1)

Disease

Listeriosis (3)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (12)
Shotgun proteomics (9)
Mass spectrometry (8)
Mass spectrometry assay (5)
Affinity purification coupled with mass spectrometry proteomics (2)
SWATH MS (2)
Ilumina HumanHap550-2v3_B-Beadstudio (1)
Illumina HiSeq 2000, Illumina HiSeq 2500 (1)
NMR spectroscopy (1)

Instrument Platform

LTQ Orbitrap (9)
Q Exactive (8)
Illumina NovaSeq 6000 (6)
Illumina HiSeq 2500 (5)
Orbitrap Fusion (5)
NextSeq 2000 (3)
LTQ Orbitrap Velos (3)
LTQ Orbitrap Elite (3)
Q Exactive HF (3)
Illumina NovaSeq X (2)
Illumina HiSeq 2000 (2)
QE-HF (2)
Orbitrap Fusion Lumos (2)
Orbitrap Eclipse (2)
Q Exactive Plus (2)
NextSeq 500, 75 bp single end lane (1)
STAR (1)
Single Cell/Low Input RNA Library Prep Kit for Illumina (#E6420S, New England Biolabs) (1)
RNA Micro Kit (Qiagen). (1)
MACS (1)
Illumina HiScanSQ (1)
ScanArray [PerkinElmer] (1)
Scanning hardware (1)
N/A (1)
NextSeq 500 (1)
MALDI Synapt G2-S HDMS (1)
Orbitrap fusion lumos (1)
Q exactive HF (1)
Xevo G2-S QTof (1)
LTQ (1)

Publication Date

2010 (24)
2004 (23)
2026 (22)
2011 (22)
2025 (18)
2013 (17)
2012 (17)
2020 (16)
2024 (14)
2021 (14)
2016 (13)
2018 (11)
2023 (10)
2022 (9)
2017 (9)
2019 (9)
2015 (8)
2014 (5)
2009 (5)
2008 (5)
2006 (5)
2007 (4)
2005 (3)
2003 (1)

UNIPROT ID/AC

Q6A4J8 (2)
P62878 (2)
Q923E4 (2)
P97769 (2)
Q76MZ3 (2)
Q9ESN9 (2)
Q9R0T8 (2)
Q91WG5 (2)
Q9WVC6 (2)
P31750 (2)
Q9R1E0 (2)
Q61501 (2)
P97377 (2)
P09671 (1)
B9PPX8_TOXGV (1)
V4ZGI5_TOXGV (1)
A0A0F7UVN4_TOXGV (1)
A0A0F7UZR3_TOXGV (1)
B9PN16_TOXGV (1)
V5BD96_TOXGV (1)
B6KBN3_TOXGV (1)
A0A125YFQ5_TOXGV (1)
B6KTY8_TOXGV (1)
B6KH93_TOXGV (1)
A0A125YTD3_TOXGV (1)
A0A0F7UZH2_TOXGV (1)
B6KHM9_TOXGV (1)
B9Q0H1_TOXGV (1)
B6KNZ3_TOXGV (1)
B9PPN2_TOXGV (1)

ENSEMBL ID

ENSG00000170477 (1)

CHEBI ID

CHEBI:28044 (6)
CHEBI:25017 (6)
CHEBI:28300 (6)
CHEBI:18237 (6)
CHEBI:29016 (6)
CHEBI:16449 (6)
CHEBI:18186 (5)
CHEBI:24898 (5)
CHEBI:27266 (5)
CHEBI:17822 (5)
CHEBI:27570 (5)
CHEBI:15428 (5)
CHEBI:25094 (5)
CHEBI:30769 (5)
CHEBI:22660 (5)
CHEBI:22653 (4)
CHEBI:26271 (4)
CHEBI:27897 (4)
CHEBI:15741 (4)
CHEBI:6650 (4)
CHEBI:16856 (4)
CHEBI:18012 (4)
CHEBI:16027 (4)
CHEBI:17505 (3)
CHEBI:16551 (3)
CHEBI:17361 (3)
CHEBI:16010 (3)
CHEBI:17755 (3)
CHEBI:17126 (3)
CHEBI:33697 (1)

Metabolite Name

Glutamic acid (3)
Aspartic acid (3)
Tyrosine (3)
Serine (3)
Phenylalanine (3)
Cystathionine (3)
Valine (3)
Tryptophan (3)
Lysine (3)
Isoleucine (3)
Leucine (3)
Histidine (3)
Glycine (3)
Glutamine (3)
Arginine (3)
Alanine (3)
Glutathione (3)
Adenine (3)
CMP (3)
Hypoxanthine (3)
Creatine (3)
Betaine (3)
Leucine (3)
Glutamine (3)
Arginine (3)
Alanine (3)
Choline (3)
Phosphoric acid (2)
Glycerol (2)
Myo-inositol (2)

First Public Date

2024 (13)
2026 (8)
2020 (8)
2019 (8)
2014 (7)
2023 (6)
2021 (4)
2013 (4)
2015 (3)
2025 (2)
2022 (2)
2017 (2)
2016 (1)

Modelling Approach

Ordinary differential equation model (3)

Lab affiliation

Institut Pasteur Unité des Interactions Bactéries-Cellules, Inserm U604, INRA USC2020 25 rue du Dr. Roux 75015 Paris France (2)
Institut Pasteur, Unité des Interactions Bactéries-Cellules, Inserm U604, INRA USC2020 25 rue du Dr. Roux 75015 Paris, France (1)
Experimental Systems Immunology, Max-Planck Institute of Biochemistry, Martinsried, Germany (1)
Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD) and Institute for Mitochondrial Diseases and Aging, Medical Faculty, University of Cologne, Cologne, Germany. (1)
Department of Pharmacology, Yale University School of Medicine (1)
Tea Research Institute, Qingdao Agricultural University, Qingdao, Shandong, China (1)
CNRS, Laboratoire Génome et Développement des Plantes, UMR 5096, 66860 Perpignan, France, and Universite Perpignan Via Domitia, Laboratoire Génome et Développement des Plantes, UMR 5096, F-66860 Perpignan, France (1)
Hong Kong University of Science and Technology (1)
Molecular Biology and Biotechnology of Fungi Institut für Biologie und Biotechnologie der Pflanzen Schlossplatz 8 48143 Münster (1)
Department of Biology, Ashoka University (1)
Division of Life Science, Center for Stem Cell Research, Center of Systems Biology and Human Health, State Key Laboratory in Molecular Neuroscience, Molecular Neuroscience Center, Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong, China. Guangdong Provincial Key Laboratory of Brain Science, Disease and Drug Development, HKUST Shenzhen Research Institute, Shenzhen-Hong Kong Institute of Brain Science, 518057, Shenzhen, Guangdong, China. (1)