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MetabolomicsComparative Metabolomic Profiling of Compatible and Incompatible Interactions Between Potato and Phytophthora infestans

Late blight is one of the main biological stresses limiting the potato yield; however, the biochemical mechanisms underlying the infection process of Phytophthora infestans remain unrevealed. In this study, the late blight-resistant potato cultivar Ziyun No.1 (R) and the susceptible cult...

2022-05-20 | MTBLS4365 | MetaboLights
MetabolomicsThe suberin transporter StABCG1 is required for barrier formation in potato leaves

Suberin is a hydrophobic biopolymer that acts as an internal and external diffusion and transpiration barrier in plants. It is involved in two phases of wound healing, i.e. initial closing layer formation and subsequent wound periderm development. Transcriptomic and metabolomic analyses of wounde...

2024-09-19 | MTBLS4823 | MetaboLights
TranscriptomicsMicroarray transcription profiling of healthy and PVYNTN infected potato tuber tissues (necrotic and non-necrotic)
To extend our understanding of systemic necrosis in susceptible potato tubers infected with the necrotic strain of Potato virus Y (PVYNTN) gene expression was compared between healthy and infected non-necrotic and necrotic (both non-necrotic and necrotic tissue) potato tubers.
ORGANISM(S): Solanum tuberosum 
2018-05-16 | E-MTAB-5776 | biostudies-arrayexpress
TranscriptomicsComparison of foliage of diploid potato clones 07506-01 and 12120-03
Verticillium dahliae Kleb., a soil-borne fungus that colonizes vascular tissues, induces wilting, chlorosis and early senescence in potato. Difference in senescence timing found in two diploid potato clones, 07506-01 and 12120-03, was studied and genetic variation in response to V. dahliae infection...
ORGANISM(S): Solanum tuberosum 
2013-07-15 | E-GEOD-48881 | biostudies-arrayexpress
MetabolomicsMulti-omics analysis of Arabidopsis leaves upon infection by necrotrophic pathogen Botrytis cinerea

Botrytis cinerea is a necrotrophic pathogen that induces host cell death, causing substantial economic losses in agriculture. In this study, we show that functional depletion of INOSITOL AUXOTROPHY 80 (INO80), a nuclear factor involved in local chromatin remodeling, reduces the susceptibility of ...

2026-03-09 | MTBLS12467 | MetaboLights
MetabolomicsTime-resolved decoding of metabolic signatures of in vitro growth of the hemibiotrophic pathogen Colletotrichum sublineolum
Metabolomics has emerged as a powerful approach to comprehensively interrogate cellular biochemistry. As such, we applied an untargeted liquid chromatography-mass spectrometry metabolomic strategy to elucidate metabolome changes in the anthracnose-causing hemibiotrophic sorghum pathogen, Colletotric...
2022-05-30 | MTBLS735 | MetaboLights
ProteomicsEffect of potato glycoside alkaloids on mitochondrial protein of Fusarium solani
Effect of Potato Glycoside Alkaloids on Mitochondria Energy Metabolism of Fusarium solani, the Root Rot Pathogen of Lycium Barbarum.
ORGANISM(S): Fusarium Solani F. Sp. Glycines 
2024-12-16 | PXD058927 |
TranscriptomicsMetabolic and transcriptomic responses of leaves from European potato reference cultivars with differential tolerance to long-term drought
Systems responses of mature leaves from 4 reference cultivars of a larger collection of European potato cultivars (Solanum tuberosum L.) are investigated by metabolome profiling and RNA-Sequencing. The chosen reference cultivars, Milva, Alegria, Desiree, and Saturna, vary in ascending order in regar...
ORGANISM(S): Solanum tuberosum 
2016-07-06 | E-GEOD-77826 | biostudies-arrayexpress
TranscriptomicsFragmentation of tRNA in Phytophthora infestans asexual life cycle stages and during host plant infection [host plant infection]
Background: The oomycete Phytophthora infestans possesses active RNA silencing pathways, which presumably enable this plant pathogen to control the large numbers of transposable elements present in its 240 Mb genome. Small RNAs (sRNAs), central molecules in RNA silencing, are known to also play key ...
ORGANISM(S): Phytophthora infestans 
2014-12-12 | E-GEOD-63292 | biostudies-arrayexpress
TranscriptomicsTime course study of phosphite treated potato leaflets
Time course study of potato leaflets (cv. Desiree) 3, 6, 11, 24 and 48 hours after phosphite treatment
ORGANISM(S): Solanum tuberosum 
2014-10-27 | E-MTAB-2243 | biostudies-arrayexpress
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