Powell J J - OmicsDI

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Unknown (2430)
Transcriptomics (58)
Proteomics (32)
Metabolomics (5)
Genomics (4)
Models (2)
Other (1)

Organisms

Homo sapiens (47)
Schizophyllum commune H4-8 (30)
Mycobacterium tuberculosis SP7 (30)
Oryza sativa Japonica Group (30)
Candidatus Endoriftia persephonae (30)
Mycobacterium tuberculosis SP10 (30)
Mycobacterium tuberculosis SP13 (30)
Mycobacterium tuberculosis SP22 (30)
Chlamydomonas reinhardtii (30)
Pyricularia oryzae P131 (30)
Enterococcus mundtii CRL35 (30)
Oncorhynchus tshawytscha (30)
Pseudomonas canadensis (30)
Strongylocentrotus purpuratus (30)
Influenza A virus (A/California/04/2009(H1N1)) (30)
Homo (30)
Pseudomonas aeruginosa PAO1H2O (30)
Human alphaherpesvirus 1 strain 17 (30)
Quercus petraea (30)
Canis lupus (30)
Mycobacterium tuberculosis SP1 (30)
Marchantia polymorpha subsp. ruderalis (30)
Mus musculus (8)
Mycobacterium tuberculosis (2)
Haemophilus influenzae (2)
Escherichia coli str. K-12 substr. MG1655 (2)
Haemophilus influenzae PittII (1)
Junonia coenia (1)
Salmo salar (1)
Escherichia coli K-12 (1)

Organisms

Burkholderia pseudomallei K96243 (1)

Repository

biostudies-arrayexpress (60)
pride (30)
MetaboLights (5)
BioModels (2)
PeptideAtlas (2)
EGA (1)
GPMDB (1)
ENA (1)

Tissue

Cell culture (7)
Others (2)
Pancreatic islet (2)
Skin (2)
Islet of Langerhans (2)
Brain (2)
Fibroblast (2)
Cellular modified amino acid catabolic process (1)
Paneth cell of epithelium of small intestine (1)
Sensory processing neuron (1)
Pancreatic beta cell line (1)
Intestinal epithelium (1)
HEK-293 cell (1)
Pancreas (1)
Macrophage (1)
Multipotent stem cell (1)
Skeletal muscle (1)
Dendritic cell (1)
Primary cell (1)
Permanent cell line cell (1)
Epithelial cell (1)
T cell (1)

Disease

Acute myeloid leukemia (8)
Type 1 diabetes mellitus (3)
Not Available (1)
Cytochrome-c oxidase deficiency disease (1)
Sensory peripheral neuropathy (1)
Mixed disorder as reaction to stress (1)
Crohn's disease (1)
Wounds and Injuries (1)
Disease free (1)

Technology Type

Mass Spectrometry (30)
Shotgun proteomics (17)
Bottom-up proteomics (6)
Data-independent acquisition (4)
Data-dependent acquisition (4)
Mass spectrometry (3)
Top-down proteomics (3)
Affinity purification coupled with mass spectrometry proteomics (3)
NMR spectroscopy (2)
SRM/MRM (2)

Instrument Platform

LTQ Orbitrap Elite (2)
ABI SOLiD v4 (1)
AB SOLiD 4 System (1)
Illumina MiSeq (1)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
NextSeq 500 (1)
Instrument (1)
Liquid Chromatography Tandem MS (LC-MS/MS (Negative)) (1)
Liquid Chromatography Tandem MS (LC-MS/MS (Positive)) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Bruker (1)
Liquid Chromatography MS - (1)
Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2011 (13)
2012 (8)
2010 (8)
2021 (8)
2019 (6)
2013 (6)
2005 (5)
2025 (5)
2015 (5)
2024 (5)
2022 (4)
2008 (4)
2023 (3)
2026 (3)
2020 (3)
2017 (2)
2016 (2)
2014 (2)
2009 (2)
2006 (2)
2018 (1)
2007 (1)
2002 (1)

UNIPROT ID/AC

Q14520 (2)
Q6UWP8 (2)
Q5T749 (2)
P01344 (2)
P00748 (2)
Q02985 (2)
P0DJI9 (2)
P0DJI8 (2)
E9PQD6 (2)
Q86YZ3 (2)
Q9UL88 (2)
Q9UL84 (2)
Q9UL72 (2)
Q9NPP6 (2)
Q96QS0 (2)
Q96PF6 (2)
Q96K68 (2)
Q96DK0 (2)
Q8WY24 (2)
Q8NCL6 (2)
Q7Z3Y6 (2)
Q7Z379 (2)
Q7Z374 (2)
Q6ZW64 (2)
Q6ZVX0 (2)
Q6P089 (2)
Q6N092 (2)
Q6N091 (2)
Q6N090 (2)
Q6N041 (2)

ENSEMBL ID

ENSG00000170477 (2)

CHEBI ID

CHEBI:15354 (3)
CHEBI:139272 (2)
CHEBI:70959 (2)
CHEBI:32980 (2)
CHEBI:18049 (2)
CHEBI:139134 (2)
CHEBI:73134 (2)
CHEBI:18132 (2)
CHEBI:22653 (2)
CHEBI:18186 (2)
CHEBI:18257 (2)
CHEBI:17802 (2)
CHEBI:17533 (2)
CHEBI:24898 (2)
CHEBI:72665 (2)
CHEBI:15428 (2)
CHEBI:28683 (2)
CHEBI:30845 (2)
CHEBI:2274 (2)
CHEBI:68830 (2)
CHEBI:31697 (2)
CHEBI:17568 (2)
CHEBI:16010 (2)
CHEBI:17750 (2)
CHEBI:18019 (2)
CHEBI:17203 (2)
CHEBI:16449 (2)
CHEBI:55328 (2)
CHEBI:28834 (2)
CHEBI:132244 (2)

Metabolite Name

LysoPE(16:0/0:0) (2)
L-Lysine (2)
L-Proline (2)
Palmitoleic acid (2)
L-Histidine (2)
Choline (2)
Deoxycholic acid (2)
Phosphorylcholine (2)
Linoleic acid (2)
Uric acid (2)
Pseudouridine (2)
Creatinine (2)
L-Carnitine (2)
L-Leucine (2)
L-Methionine (2)
N-Acetyl-aminooctanoic acid (1)
DL-alpha-Aminosuberic acid (1)
L-4-Hydroxyglutamate (1)
DL-beta-leucine (1)
Imidazole acetaldehyde (1)
2,2',2''-((2R,5R,8S,11R)-11-((2R,4S,5E,7E,9E)-2,4-dihydroxypentadeca-5,7,9-trien-1-yl)-3,6,9,13,17-pentaoxo-1,4,7,10,14-pentaazacycloheptadecane-2,5,8-triyl)triacetamide (1)
(3R,5R,7S,8E,10E,12E)-3-amino-5,7-dihydroxyoctadeca-8,10,12-trienoic acid (1)
(3-((3R,5R,7S,8E,10E,12E)-3-amino-5-hydroxy-7-methoxyoctadeca-8,10,12-trienamido)propanoyl)-D-asparaginyl-D-asparagine (1)
(3-((3R,5R,7S,8E,10E,12E)-3-amino-5-hydroxy-7-methoxyoctadeca-8,10,12-trienamido)propanoyl)-D-asparagine (1)
3-((3R,5R,7S,8E,10E,12E)-3-amino-5-hydroxy-7-methoxyoctadeca-8,10,12-trienamido)propanoic acid (1)
(3R,5R,7S,8E,10E,12E)-3-amino-5-hydroxy-7-methoxyoctadeca-8,10,12-trienoic acid (1)
Ascorbate (1)
Hydroxy-alpha-sanshool (1)
DG(18:3(6Z,9Z,12Z)/15:0/0:0) (1)
(?¡À)-Sulfobutanedioic acid (1)

First Public Date

2016 (1)

Lab affiliation

Crick-GSK LinkLabs, UK (3)
Senior Lecturer, Norwich Medical School, University of East Anglia UEA (1)
Newcastle University Biosciences Institute, Newcastle University, Newcastle upon Tyne, UK (1)
University of Southern Denmark (SDU), Department of Biochemistry and Molecular Biology (BMB) (1)
Department of Clinical Neurosciences, School of Clinical Medicine, University of Cambridge, Cambridge, UK (1)
Food Safety Centre, Tasmanian Institute of Agriculture, University of Tasmania, Sandy Bay, Hobart, Tasmania, Australia (1)
Immunocore Ltd. (1)
University of Colorado Denver Anschutz Medical Campus, Department of Pharmaceutical Sciences, Colorado, USA (1)
Chair in Infection and Global Health, Department of Infection Biology, Institute of Infection and Global Health, University of Liverpool, UK (1)
Immunocore, Milton, UK (1)
Parker Institute for Cancer Immunotherapy, Center for Cellular Immunotherapies, Perelman School of Medicine, University of Pennsylvania, South Pavilion Tower, Building 421, Rm 8-103 3400 Civic Center Blvd. Philadelphia, PA 19104-5157 (1)
Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, 30 Flemington Road, Parkville, Victoria 3052 Australia (1)
King's College London Centre for Inflammation Biology & Cancer Immunology School of Immunology & Microbial Sciences 1st Floor New Hunt's House, Guy's Campus London, UK SE1 1UL (1)
Department of Pharmacology and Toxicology University of Texas Medical Branch Galveston, TX 77555 USA (1)
Director of Biochemistry, Vaccine Company, Inc (1)
University of Colorado Anschutz Medical Campus, Skaggs School of Pharmacy and Pharmaceutical Sciences (1)
Department of Basic and Clinical Neuroscience, The Maurice Wohl Clinical Neuroscience Institute, Institute of Psychiatry, Psychology, & Neuroscience, King’s College London, London, UK (1)
Residorph Lab, Mass Spectrometry Core - Skaggs School of Pharmacy, University of Colorado - Anschutz Medical Campus (1)
U o Cambridge (1)
1Department of Neuroscience & Center for Translational Research in Neurodegenerative Disease, University of Florida, Gainesville, FL, USA (1)
Department of Neurobiology, Harvard Medical School; Boston, USA. (1)
Dietrich School of Arts and Sciences, University of Pittsburgh (1)
Department of Pharmaceutical Sciences Skaggs School of Pharmacy and Pharmaceutical Sciences University of Colorado (1)
Centre for Cellular and Molecular Physiology, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7BN, United Kingdom (1)
Proteomics Science and Technology Platform The Francis Crick Institute United Kingdom (1)
Department of Pharmaceutical Sciences, University of Colorado - Anschutz Medical Campus, Aurora, CO, USA (1)
Department of Biology, Stanford University, USA (1)
University of Victoria (1)

IsPrivate

False (2)

Model Flag

Non Kinetic (2)

Classification

bacteria (1)

Study type

Transcription profiling by array (34)
RNA-seq of coding RNA (9)
Unknown experiment type (5)
MicroRNA profiling by array (5)
ChIP-chip by tiling array (2)
ChIP-seq (2)
Transcription profiling by tiling array (1)
Comparative genomic hybridization by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2023 (262)
2021 (253)
2025 (246)
2022 (244)
2024 (213)
2020 (179)
2017 (128)
2018 (127)
2019 (126)
2015 (117)
2014 (114)
2016 (110)
2011 (70)
2013 (63)
2012 (62)
2010 (42)
2009 (35)
2008 (28)
2026 (25)
2006 (12)
2007 (11)
2005 (8)
2004 (5)
2002 (3)
2003 (2)
2000 (2)
1998 (2)
1999 (1)

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RNA-Seq of eye tissue from a seasonally plastic temperate butterfly

Changes in sensory gene expression may underly seasonal changes in behavior. To accompany other research on seasonal changes in coloration and behavior in the seasonally plastic common buckeye butterfly Junonia coenia, we examined how gene expression in eyes differs between wild butterflies caught...

ORGANISM(S): Junonia coenia

2025-10-24 | E-MTAB-15925 | biostudies-arrayexpress

Elevated CO2 and virus infection impacts wheat and aphid metabolism

INTRODUCTION: The aphid Rhopalosiphum padi L. is a vector of Barley yellow dwarf virus (BYDV) in wheat and other economically important cereal crops. Increased atmospheric CO2 has been shown to alter plant growth and metabolism, enhancing BYDV disease in wheat. However, the bioch...

2019-01-16 | MTBLS622 | MetaboLights

On a Continuous Aqueous Thermogalvanic Redox Agent with Anomalous Thermopower.

Not available

S-EPMC12333407 | biostudies-literature

Generation of fast photoelectrons in strong-field emission from metal nanoparticles.

Not available

S-EPMC12038575 | biostudies-literature

NMR structure of the first extracellular domain of corticotropin-releasing factor receptor 1 (ECD1-CRF-R1) complexed with a high affinity agonist.

Not available

S-EPMC2992290 | biostudies-literature

Adiponectin links maternal metabolism to uterine contractility.

Not available

S-EPMC6894045 | biostudies-literature

Normalizing adiponectin levels in obese pregnant mice prevents adverse metabolic outcomes in offspring.

Not available

S-EPMC6338628 | biostudies-literature

A Prader-Willi locus lncRNA cloud modulates diurnal genes and energy expenditure.

Prader-Willi syndrome (PWS), a genetic cause of childhood obesity, is characterized by intellectual disabilities and sleep abnormalities. PWS-causing deletions include a neuronal long, non-coding RNA (lncRNA) processed into small nucleolar RNAs and a spliced lncRNA,116HG. We show that 116HG forms a ...

ORGANISM(S): Mus musculus

2013-06-20 | E-GEOD-43575 | biostudies-arrayexpress

Untargeted plasma metabolome identifies biomarkers in patients with extracranial arteriovenous malformations

OBJECTIVE: This study aimed to investigate the plasma metabolic profile of patients with extracranial arteriovenous malformations (AVM).

METHOD: Plasma samples were collected from 32 AVM patients and 30 healthy controls (HC). Ultra-high performance liquid c...

2023-10-30 | MTBLS7753 | MetaboLights

Determining TCR Binding Orientation and Peptide-HLA Interac-tions Using Cross-Linking Mass Spectrometry

T cell receptors (TCRs) recognize specific peptides presented by human leukocyte antigens (HLAs) on the surface of antigen presenting cells and are involved in fighting pathogens and cancer surveillance. Canonical docking orientation of TCRs to their target peptide-HLAs (pHLAs) is essential for T ce...

ORGANISM(S): Escherichia coli

2025-05-07 | PXD056652 | Pride

Lc-ms/ms Cross-linking

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2532 Results

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