Pri-mirnas - OmicsDI

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Transcriptomics (2937)
Unknown (383)
Genomics (364)
Proteomics (49)
Other (22)
Metabolomics (8)
Multiomics (3)

Organisms

Homo sapiens (1638)
Mus musculus (702)
Arabidopsis thaliana (113)
Drosophila melanogaster (107)
Rattus norvegicus (103)
Caenorhabditis elegans (44)
Danio rerio (31)
Sus scrofa (28)
Bos taurus (26)
synthetic construct (21)
Oryza sativa (20)
Gallus gallus (18)
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Bombyx mori (5)
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Citrus sinensis (5)
Cricetulus griseus (5)
Hordeum vulgare (5)
Canis lupus familiaris (5)
Capsicum annuum (4)
Sorghum bicolor (4)
Oryza sativa Indica Group (4)

Organisms

Homo sapiens (64)
Arabidopsis thaliana (31)
Mus musculus (17)
synthetic construct (6)
Drosophila melanogaster (6)
Caenorhabditis elegans (2)
Dictyostelium discoideum AX2 (1)
Ovis aries (1)
Glycine max (1)
Bos taurus (1)
Sus scrofa (1)

Repository

biostudies-arrayexpress (2954)
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Tissue

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Illumina HiSeq 2000 (6)
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Exiqon 7th generation miRCURY LNA microRNA microarray system (1)
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ILLUMINA, Illumina HiSeq 2500 (1)
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Ilumina HumanHap550-2v3_B-Beadstudio (1)
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Instrument Platform

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None (4)
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DNBSEQ-G400 (4)
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R (3)
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PC (2)
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AB SOLiD System 3.0 (2)
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Publication Date

2014 (435)
2012 (428)
2013 (424)
2010 (378)
2011 (329)
2015 (324)
2016 (200)
2009 (115)
2008 (99)
2025 (51)
2017 (44)
2024 (39)
2026 (38)
2021 (34)
2007 (34)
2022 (29)
2019 (28)
2020 (27)
2018 (26)
2023 (18)
2005 (15)
2006 (10)
2004 (1)

UNIPROT ID/AC

A3QMC5 (4)
A7DT45 (4)
B3CJ34 (4)
B3GWA1 (4)
B6EU49 (4)
C1P640 (4)
D0IMZ5 (4)
D1MN85 (4)
D3YT36 (4)
D5MCN2 (4)
E9RKC7 (4)
G1K0V8 (4)
G4S034 (4)
G4SLH0 (4)
G4SPY0 (4)
G5EBH3 (4)
G5EBI0 (4)
G5EBP5 (4)
G5EBR1 (4)
G5EBY3 (4)
G5EC16 (4)
G5EC78 (4)
G5ECL3 (4)
G5ECM6 (4)
G5ECU1 (4)
G5ECU5 (4)
G5ED07 (4)
G5ED27 (4)
G5ED29 (4)
G5EDA3 (4)

CHEBI ID

CHEBI:15741 (3)
CHEBI:76942 (2)
CHEBI:1606 (2)
CHEBI:17023 (2)
CHEBI:17754 (2)
CHEBI:64294 (2)
CHEBI:72665 (2)
CHEBI:17858 (2)
CHEBI:62084 (2)
CHEBI:15698 (2)
CHEBI:18295 (2)
CHEBI:18132 (2)
CHEBI:17015 (2)
CHEBI:32816 (2)
CHEBI:16695 (2)
CHEBI:16708 (2)
CHEBI:17596 (2)
CHEBI:17368 (2)
CHEBI:30769 (2)
CHEBI:133773 (1)
CHEBI:16264|CHEBI:24156 (1)
CHEBI:27354|CHEBI:28721 (1)
CHEBI:1148|CHEBI:19641 (1)
CHEBI:16196| (1)
CHEBI:28721|CHEBI:27353 (1)
CHEBI:59640|CHEBI:28800 (1)
CHEBI:136341 (1)
CHEBI:30835|CHEBI:36458 (1)
CHEBI:140366 (1)
CHEBI:134642 (1)

Metabolite Name

LPI(20:4) (2)
PE(16:0/18:1) (2)
PC(16:0/18:1) (2)
Biliverdin (2)
Histidine (2)
UDP-glucuronate (2)
3'-AMP (2)
Leucine (2)
FAD (2)
Hypoxanthine (2)
Phosphate (2)
CMP (2)
Aspartate (2)
AMP (2)
Alanine (2)
Carnosine (2)
ADP (2)
Succinic acid (2)
UMP (2)
Citric acid (2)
Phenylalanine (2)
Cytidine (2)
X - 25182 (1)
X - 25109 (1)
X - 25047 (1)
X - 25035 (1)
X - 25009 (1)
X - 24983 (1)
X - 24865 (1)
X - 24699 (1)

First Public Date

2014 (22)
2024 (19)
2017 (15)
2023 (14)
2020 (14)
2019 (11)
2022 (10)
2018 (10)
2013 (10)
2025 (8)
2021 (8)
2026 (7)
2016 (5)
2015 (5)

Classification

protozoa (1)

Study type

Transcription profiling by array (1628)
RNA-seq of non coding RNA (616)
RNA-seq of coding RNA (235)
MicroRNA profiling by array (145)
Other (75)
Transcription profiling by RT-PCR (63)
ChIP-seq (39)
MicroRNA profiling by high throughput sequencing (35)
Comparative genomic hybridization by array (19)
Methylation profiling by array (14)
RNA-seq of total RNA (11)
Unknown experiment type (8)
RNAi profiling by array (7)
MicroRNA profiling by high-throughput sequencing (6)
ChIP-chip by tiling array (6)
Methylation profiling by high throughput sequencing (6)
Transcription profiling by tiling array (5)
ChIP-chip by array (5)
Human - High-throughput sequencing (4)
Genotyping by array (4)
Animal - One-color microarray (3)
High-throughput sequencing (2)
Human - One-color microarray (2)
DNA-seq (2)
Transcription profiling by SAGE (1)
Animal - Two-color microarray (1)
Cell line - One-color microarray (1)
Animal - High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
Spatial transcriptomics by high-throughput sequencing (1)

Release Date

2014 (458)
2013 (436)
2012 (436)
2010 (389)
2015 (340)
2011 (333)
2016 (216)
2009 (125)
2008 (110)
2017 (60)
2022 (50)
2025 (49)
2024 (47)
2021 (47)
2020 (41)
2007 (38)
2019 (37)
2026 (36)
2018 (30)
2023 (27)
2005 (18)
2006 (11)
2004 (3)

Lab affiliation

Department of Experimental Oncology, IEO, European Institute of Oncology IRCCS, Milan, Italy (1)
Institut de Biologie Moléculaire des Plantes, Centre National de la Recherche Scientifique, UPR 2357, Université de Strasbourg, Strasbourg, France. (1)
Seoul National University (1)
State Key Laboratory of Genetic Engineering & Institute of Plant Biology, School of Life Sciences, Fudan University, Shanghai 200438, China (1)

Tags

pathogen:protozoan (1)
pathogen (1)

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Single cut products of Microprocessor on pri-miRNAs

PRJNA577891 | ENA

NF90 Modulates Processing of a Subset of Human Pri-miRNAs

PRJNA547631 | ENA

The high-throughput cleavage assays on 137 C.elegans pri-miRNAs

PRJNA874678 | ENA

A Role for the RNA-Binding Protein MOS2 in MicroRNA Maturation in Arabidopsis

microRNAs (miRNAs) play important roles in the regulation of gene expression. In Arabidopsis, mature miRNAs are processed from primary miRNA transcripts (pri-miRNAs) by nuclear HYL1/SE/DCL1 complexes that form Dicing bodies (D-bodies). Here we report that a RNA-binding protein MOS2 bound to pri-miRN...

ORGANISM(S): Arabidopsis thaliana

2012-10-27 | E-GEOD-41843 | biostudies-arrayexpress

NF90 modulates processing of a subset of human pri-miRNAs.

Not available

S-EPMC7337520 | biostudies-literature

Transcriptional, post-transcriptional and chromatin-associated regulation of pri-miRNAs, pre-miRNAs and moRNAs.

Not available

S-EPMC4838339 | biostudies-literature

Hyponastic Leaves 1 protects pri-miRNAs from nuclear exosome attack.

Not available

S-EPMC7382309 | biostudies-literature

Small ORFs as New Regulators of Pri-miRNAs and miRNAs Expression in Human and Drosophila.