Profilin 4 - OmicsDI

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Transcriptomics (344)
Unknown (56)
Genomics (20)
Proteomics (20)
Metabolomics (4)

Organisms

Homo sapiens (55)
Arabidopsis thaliana (47)
Mus musculus (20)
Triticum aestivum (18)
Solanum lycopersicum (12)
Glycine max (12)
Medicago truncatula (11)
Zea mays (11)
Hordeum vulgare (11)
Populus x canadensis (8)
Solanum tuberosum (8)
Entamoeba histolytica (6)
Vitis vinifera (6)
Populus tremula x Populus alba (6)
Caenorhabditis elegans (5)
Pimephales promelas (4)
Oryza sativa (4)
Danio rerio (4)
Citrus limonia (3)
Populus simonii (3)
Olea europaea (3)
Paxillus involutus (3)
Ectocarpus siliculosus (3)
Populus tremula x Populus tremuloides (3)
Populus trichocarpa (3)
Pseudomonas putida (3)
Hordeum vulgare subsp. vulgare (3)
Oryza sativa Japonica Group (3)
Gallus gallus (3)
Miscanthus sinensis (2)

Organisms

Homo sapiens (2)
Gallus gallus (1)
Mus musculus (1)

Repository

biostudies-arrayexpress (355)
pride (9)
iProX (5)
EGA (4)
geo (4)
MetaboLights (4)
ENA (4)
MassIVE (3)
jPOST (1)
PanoramaPublic (1)
PAXDB (1)

Tissue

Cell culture (2)
Neural crest (1)
Sperm (1)
Promastigote (1)
Shoot (1)
Plant cell (1)
Macrophage (1)
Bronchoalveolar lavage (1)
Blood plasma (1)
Testis (1)
Leaf (1)
Kidney (1)
Blood cell (1)

Disease

Normal (3)
Amyotrophic lateral sclerosis (2)
TSWV infected (1)
Visceral leishmaniasis (1)
Cardiovascular system disease (1)
Male infertility (1)

Technology Type

Mass Spectrometry (9)
Mass spectrometry (3)
Top-down proteomics (3)
Affinity purification coupled with mass spectrometry proteomics (3)
Shotgun proteomics (2)
Mass spectrometry assay (1)
HDMSE (1)
SRM/MRM (1)
Data-dependent acquisition (1)

Instrument Platform

Illumina NovaSeq 6000 (14)
Illumina HiSeq 4000 (8)
Illumina HiSeq 2000 (7)
Illumina HiSeq 2500 (5)
NextSeq 500 (4)
Axon GenePix 4000A scanning hardware (2)
Illumina NovaSeq X (2)
DNBSEQ-G400 (2)
Illumina HiSeq 1000 (2)
Illumina HiSeq 1500 (2)
IPK PhenoSphere (1)
UC Irvine HPC (1)
Bioanalyzer, Nanodrop, (1)
Deeptools, macs3 (1)
Maxwell® 16 AS2000 (1)
Agilent scanner G2505B (1)
Illumina iScan (1)
Sequel (1)
2100 Bioanalyzer (Agilent, CA, USA), Qubit 2.0 (Invitrogen, Germany) (1)
Affymetrix GeneChip Scanner 3000 7G (1)
ScanArray scanning hardware (1)
ScanArray 5000 [PerkinElmer] (1)
GeneChip Scanner 3000 [Affymetrix] (1)
GenePix Personal 4100A [Axon Instruments] (1)
GenePix Professional 4200A [Axon Instruments] (1)
G2565AA DNA microarray scanner [Agilent] (1)
Spectronic Helios Alpha UV-Vis spectrophotometer (1)
Illumina Genome Analyzer IIx (1)
GenePix 4000B [Axon Instruments] (1)
Illumina Genome Analyzer II (1)

Publication Date

2014 (41)
2012 (39)
2011 (37)
2013 (34)
2010 (31)
2015 (29)
2016 (24)
2005 (21)
2008 (18)
2009 (16)
2025 (15)
2022 (11)
2026 (10)
2007 (10)
2023 (8)
2024 (7)
2019 (7)
2017 (7)
2021 (6)
2020 (5)
2018 (3)
2006 (2)

UNIPROT ID/AC

YORR_BACSU (1)
RHAB_BACSU (1)
YAAI_BACSU (1)
CBP1_BACSU (1)
YHFQ_BACSU (1)
ILVA_BACSU (1)
COTA_BACSU (1)
SP0J_BACSU (1)
LEPU_BACSU (1)
NIN_BACSU (1)
YWMC_BACSU (1)
YHCG_BACSU (1)
YOAV_BACSU (1)
YDZF_BACSU (1)
GLSA2_BACSU (1)
EX7L_BACSU (1)
NATR_BACSU (1)
YKUK_BACSU (1)
YXIB_BACSU (1)
YUKD_BACSU (1)
YHFS_BACSU (1)
YYAT_BACSU (1)
YIZA_BACSU (1)
GLXK_BACSU (1)
CIDA_BACSU (1)
YPUF_BACSU (1)
GUB_BACSU (1)
PSPA_BACSU (1)
YDBS_BACSU (1)
FLHP_BACSU (1)

CHEBI ID

CHEBI:192835 (1)
CHEBI:192874 (1)
CHEBI:192870 (1)
CHEBI:192865 (1)
CHEBI:192847 (1)
CHEBI:192837 (1)
CHEBI:192008 (1)
CHEBI:169844 (1)
CHEBI:186226 (1)
CHEBI:175534 (1)
CHEBI:192935 (1)
CHEBI:183031 (1)
CHEBI:192927 (1)
CHEBI:192923 (1)
CHEBI:183546 (1)
CHEBI:192922 (1)
CHEBI:169044 (1)
CHEBI:192917 (1)
CHEBI:69097 (1)
CHEBI:187102 (1)
CHEBI:176316 (1)
CHEBI:192915 (1)
CHEBI:174481 (1)
CHEBI:175792 (1)
CHEBI:192906 (1)
CHEBI:192903 (1)
CHEBI:192900 (1)
CHEBI:188436 (1)
CHEBI:175504 (1)
CHEBI:187118 (1)

Metabolite Name

6-hydroxyflavone-alpha-D-glucoside (1)
Methyl 2,6-dihydroxybenzoate (1)
6-o-[alpha-d-glucopyranosyl]-d-fructose (1)
6-o-methyl-alpha-D-glucopyranose (1)
2-methyl-2,4-dihydroxyglutarate (1)
Glycerol-3-galactoside (1)
Alpha tocopherol (1)
7-(1-methylethyl)-5-oxo-2-amino-5h-chromeno[2,3-b]pyridine-3-carboxylate (1)
D-fructose 2,6-bisphosphate (1)
2-methylpropan-2-ol (1)
Cis-gondoic acid (1)
2-desoxy-inosose (1)
Arabino-hexos-2-ulose, bis(dimethyl acetal) (1)
3,4-dihydroxy-2,5-furandione (1)
N-(hydroxymethyl)trifluoroacetamide (1)
Udp-l-arabinose (1)
Methoxyamine (1)
2-hydroxyundecanoate (1)
5,7-dihydroxy-4'-methoxyisoflavone (1)
Cholesterone (1)
Delta-tocopherol (1)
Myo-inositol phosphate (1)
Glycero-d-gulo-heptose (1)
D-fructose-1-phosphate (1)
1,4-dihydroxy-2,6-dimethoxybenzene (1)
N'-(1h-indol-3-ylmethylene)benzohydrazide (1)
Dimethyluric acid (1)
D-fructose-1,6-bisphosphate (1)
D-fructose-6-phosphate (1)
2-o-methyl-gluconic acid (1)

First Public Date

2014 (2)
2026 (1)
2024 (1)

Study type

Transcription profiling by array (222)
RNA-seq of coding RNA (76)
RNA-seq of non coding RNA (11)
Other (6)
Unknown experiment type (5)
ChIP-seq (5)
Plant - High-throughput sequencing (4)
Methylation profiling by high throughput sequencing (4)
DNA-seq (3)
CUT&RUN (3)
Transcription profiling by SAGE (2)
Transcription profiling by tiling array (2)
ChIP-chip by tiling array (1)
Plant - One-color microarray (1)
Human - One-color microarray (1)
ChIP-chip by array (1)
Comparative genomic hybridization by array (1)
RIP-seq (1)
Methylation profiling by array (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of total RNA (1)

Release Date

2014 (43)
2012 (42)
2011 (36)
2013 (35)
2010 (31)
2015 (30)
2016 (27)
2005 (23)
2025 (18)
2008 (18)
2009 (16)
2007 (12)
2020 (11)
2024 (9)
2019 (9)
2017 (9)
2026 (8)
2021 (8)
2018 (8)
2023 (7)
2022 (6)
2006 (2)
2004 (1)
2001 (1)
1999 (1)

Lab affiliation

Centre for Cancer Biology, University of South Australia and SA Pathology, Adelaide, Australia (1)
Professor of Neurology UMass Chan Medical School Albert Sherman Center, AS6-1057 368 Plantation Dr. Worcester, MA 01605 (1)
Department of Developmental Pathology, Institute of Pathology, University Hospital Bonn, 53127 Bonn, Germany (1)
Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute. The University of Melbourne. (1)
Universidade Estadual do Norte Fluminense Darcy Ribeiro Laboratório de Biologia Celular ou Tecidual Av. Alberto Lamego 2000 - Campos dos Goytacazes-RJ 28013-602 - Brazil (lab head) (1)
Department of Life Sciences, University of Siena Via Aldo Moro 2, 53100 Siena, Italy (1)
University of Massachusetts, Department of Neurology (1)
Translational Mass Spectrometry Research Group, UCL Institute of Child Health and Great Ormond Street Hospital, 30 Guilford Street, London, WC1N 1EH, UK (1)
Institute of Bioinformatics and Applied Biotechnology, Bangalore, India (1)

Tags

xref:PubMed:38509062 (1)
xref:PubMed:23593150 (1)
xref:PubMed:19794069 (1)

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Potential binding partners of profilin protein from Leishmania donovani

For identifying potential ligands of Leishmania profilin (LdPfn) protein, full length profilin was cloned and expressed with GST tag. Only GST tag protein was used as a negative control. Employing pull down assay and with the help of LC-MS, the potential binding partners of profilin protein in Leish...

ORGANISM(S): Leishmania donovani BPK282A1

2022-03-10 | PXD026036 | Pride

The effects of novel adjuvant complex and CpG ODN on host immune response to recombinant Eimeria profilin vaccine

This study investigated the ability of two novel adjuvant formulations, QCDC (Quil A/cholesterol/DDA/Carbopol) and QCDCR (QCDC/Bay R1005), in combination with a recombinant profilin vaccine, to modulate host protective immunity and to alter new gene expression during experimental avian coccidiosis. ...

ORGANISM(S): Gallus gallus

2010-10-28 | E-GEOD-24966 | biostudies-arrayexpress

Profilin connects actin assembly with microtubule dynamics.

Not available

S-EPMC4966980 | biostudies-literature

Trancriptomic profilin of HLMVECs following catecholamine exposure

PRJNA1399421 | ENA

Profilin as a regulator of the membrane-actin cytoskeleton interface in plant cells.

Not available

S-EPMC3867660 | biostudies-literature

Identification of novel biomarkers for aortic aneurysm

To discover novel biomarkers for aortic aneurysm, serum samples of patients with thoracic aortic aneurysm were fractionated, tryptic digested, and subjected to proteome analysis.

ORGANISM(S): Homo Sapiens (human)

2023-11-15 | PXD033774 | JPOST Repository

Immunoenhancing effects of Montanide adjuvant on recombinant coccidia antigen vaccination against Eimeria spp. and comparative microarray analysis of intestinal lymphocytes

This study utilized comparative global gene expression microarray analysis to evaluate the effects of two different Montanide adjuvants, ISA70 and ISA71, in promoting chicken protective immunity following vaccination with profilin, an actin-regulatory protein that is expressed by multiple Eimeria sp...

ORGANISM(S): Gallus gallus

2012-09-11 | E-GEOD-40743 | biostudies-arrayexpress

Structural, Functional, and Immunological Characterization of Profilin Panallergens Amb a 8, Art v 4, and Bet v 2.

Not available

S-EPMC4957032 | biostudies-literature

Taro Raphide-Associated Proteins: Profilin, Allergens and Crystal Growth

Calcium oxalate raphide crystals are found in bundles in intravacuolar membrane chambers of specialized idioblasts cells of most plant families including many crop plants and are found in most tissues. Raphides are needle-shaped, often with barbed ends, and their morphology and biomineralization pat...

ORGANISM(S): Colocasia esculenta

2022-02-19 | GSE191235 | GEO

Profilin Directly Promotes Microtubule Growth through Residues Mutated in Amyotrophic Lateral Sclerosis.

Not available

S-EPMC5772683 | biostudies-literature

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