Protein solubility

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Unknown (2320)
Proteomics (275)
Transcriptomics (104)
Genomics (58)
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Other (4)
Models (2)

Organisms

Schizosaccharomyces pombe (205)
Human immunodeficiency virus 1 (205)
Oryza sativa Indica Group (205)
Sinorhizobium meliloti BL225C (205)
Sus scrofa domesticus (205)
Ostreococcus tauri (205)
Saccharomyces cerevisiae (205)
Vitis vinifera (205)
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Purpureocillium lilacinum (1)
Botrytis cinerea (1)
Nothobranchius furzeri (1)
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Organisms

Homo sapiens (14)
Saccharomyces cerevisiae (3)
Drosophila melanogaster (2)
Nothobranchius furzeri (1)
Vicugna pacos (1)
Botrytis cinerea (1)
Purpureocillium lilacinum (1)

Repository

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biostudies-arrayexpress (91)
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geo (35)
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PAXDB (1)

Tissue

Cell culture (47)
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Blood (4)
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Mesentery (1)
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Colonic epithelium cell line (1)

Disease

Disease free (8)
Acute leukemia (4)
Alzheimer's disease (3)
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Not Available (2)
Lung cancer (2)
Acute myeloid leukemia (2)
Breast cancer (2)
Colon cancer (2)
Prion disease (1)
MFC II (1)
Mammary adenocarcinoma (pleural effusion) (1)
No local recurrence (1)
Triple negative breast cancer (1)
Marsh 3 (1)
Oligodendroglioma (1)
Normal (1)
Charlevoix-Saguenay spastic ataxia (1)
Systolic heart failure (1)
Immunoglobulin light chain amyloidosis (1)
Senile cataract (1)
Alzheimer's disease 1 (1)
Amyotrophic lateral sclerosis type 1 (1)
Dilated cardiomyopathy (1)
Parasitic helminthiasis infectious disease (1)

Technology Type

Mass Spectrometry (205)
Shotgun proteomics (115)
Bottom-up proteomics (46)
Data-dependent acquisition (30)
Data-independent acquisition (25)
Gel-based experiment (20)
Mass spectrometry (6)
Top-down proteomics (6)
Affinity purification coupled with mass spectrometry proteomics (5)
Chemical cross-linking coupled with mass spectrometry proteomics (4)
SWATH MS (3)
Affinity proteomics (2)
SRM/MRM (2)
Mass spectrometry assay (1)
Mass spectrometry imaging (1)
MSE (1)

Instrument Platform

LTQ Orbitrap Velos (35)
LTQ Orbitrap Elite (9)
GenePix 4000A [Axon Instruments] (3)
Orbitrap Astral (3)
Orbitrap Exploris 480 (3)
Liquid Chromatography MS - positive - hilic (3)
Agilent High resolution C scanner (2)
Instrument (2)
Q Exactive (2)
Liquid Chromatography MS - negative - reverse phase (2)
Coulter Automated Workstation Biomek i7 Hybrid (1)
RNeasy 96-well plate kit (1)
ScanArray 5000 [PerkinElmer] (1)
None (1)
NextSeq 2000 (1)
Illumina HiSeq 2500 (1)
NextSeq 500 (1)
GC-MS (1)
MicrOTOF-Q II (1)
MaXis II (1)
TimsTOF Pro (1)
Orbitrap Fusion (1)
Flow injection analysis MS - negative (1)
Flow injection analysis MS - positive (1)
Direct infusion MS - positive (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)

Publication Date

2026 (52)
2015 (47)
2025 (40)
2010 (33)
2023 (33)
2024 (30)
2021 (23)
2022 (23)
2009 (16)
2008 (15)
2020 (14)
2016 (14)
2018 (11)
2019 (10)
2011 (8)
2007 (8)
2013 (5)
2012 (5)
2017 (5)
2006 (4)
2014 (3)
2005 (3)

UNIPROT ID/AC

P37840 (1)
B5X213_SALSA (1)
A0A1S3MJ74_SALSA (1)
A0A1S3LJ89_SALSA (1)
NU5M_SALSA (1)
A0A1S3T0K5_SALSA (1)
A0A1S3KNX9_SALSA (1)
A0A1S3P7U2_SALSA (1)
A0A1S3QCR9_SALSA (1)
PYM1B_SALSA (1)
A0A1S3L8A9_SALSA (1)
8030.ENSSSAP00000118498 (1)
A0A1S3QBI1_SALSA (1)
B5X2B1_SALSA (1)
B5DH22_SALSA (1)
8030.ENSSSAP00000025413 (1)
B5XBA5_SALSA (1)
A0A1S3KQ15_SALSA (1)
A0A1S3SWS3_SALSA (1)
B5X0T0_SALSA (1)
A0A1S3MVT0_SALSA (1)
A0A1S3R5J0_SALSA (1)
B5DFU7_SALSA (1)
B9EL89_SALSA (1)
8030.ENSSSAP00000061909 (1)
A0A1S3NCH1_SALSA (1)
8030.ENSSSAP00000088105 (1)
A0A1S3Q7M0_SALSA (1)
8030.ENSSSAP00000009338 (1)
B5DGQ4_SALSA (1)

ENSEMBL ID

ENSMUSP00000141097 (2)
ENSMUSG00000072849 (1)
ENSMUSG00000098557 (1)

CHEBI ID

CHEBI:28595 (3)
CHEBI:28862 (3)
CHEBI:545959 (3)
CHEBI:17164 (3)
CHEBI:16880 (3)
CHEBI:27838 (3)
CHEBI:16556 (3)
CHEBI:41500 (3)
CHEBI:70984 (3)
CHEBI:16192 (3)
CHEBI:15694 (3)
CHEBI:17140 (3)
CHEBI:16946 (3)
CHEBI:16634 (3)
CHEBI:35704 (3)
CHEBI:17172 (3)
CHEBI:17295 (3)
CHEBI:16977 (3)
CHEBI:36575 (3)
CHEBI:17015 (3)
CHEBI:16410 (3)
CHEBI:18405 (3)
CHEBI:18019 (3)
CHEBI:15971 (3)
CHEBI:17405 (3)
CHEBI:15891 (3)
CHEBI:16927 (3)
CHEBI:17752 (3)
CHEBI:16436 (3)
CHEBI:60425 (1)

Metabolite Name

D-Xylose (3)
D-Xylulose (3)
L-Arabinose (3)
Nicotinamide (3)
Lysine (3)
Phenylalanine (3)
D-Ribose (3)
Hypoxanthine (3)
Adenine (3)
L-Ribulose (3)
D-Arabinofuranose (2)
17beta-Methoxyandrost-5-ene-3beta,16beta-diol (2)
17beta-Hydroxy-2alpha-(hydroxymethyl)-5alpha-androstan-3-one (2)
3beta-Hydroxy-16beta-(hydroxymethyl)-5alpha-androstan-17-one (2)
Sophoranol (2)
Lamprolobine (2)
Erythratidine (2)
11beta,17beta-Dihydroxy-17alpha-methylandrosta-1,4-dien-3-one (2)
11alpha,17beta-Dihydroxy-17alpha-methylandrosta-1,4-dien-3-one (2)
Mytatrienediol (2)
Cinerin I (2)
Taxodone (2)
Royleanone (2)
2,6-Dimethylhexestrol (2)
(3S)-11-cis-3-Hydroxyretinal (2)
(3R)-11-cis-3-Hydroxyretinal (2)
A-Norpregn-3(5)-ene-2,20-dione (2)
17beta-Hydroxy-2-methylandrost-1,4-dien-3-one (2)
17beta-Hydroxy-17-methylandrosta-4,9(11)-dien-3-one (2)
Spruceanol (2)

First Public Date

2026 (9)
2025 (9)
2024 (9)
2023 (2)
2021 (2)
2017 (2)
2022 (1)
2020 (1)
2019 (1)
2018 (1)
2014 (1)

Modelling Approach

Ordinary differential equation model (2)

Lab affiliation

Associate Member, St. Jude Faculty Developmental Neurobiology St. Jude Children's Research Hospital Memphis, TN-38105 (10)
Institute of Molecular Biology (IMB), 55128 Mainz, Germany; Institute of Developmental Biology and Neurobiology (IDN), Johannes Gutenberg University, 55128 Mainz, Germany (7)
European Molecular Biology Laboratory (4)
European Molecular Biology Laboratory (EMBL), Genome Biology Unit (3)
Department of Chemistry and Bioscience Aalborg University Denmark (3)
Chemistry I, Department of Medical Biochemistry and Biophysics, Karolinska Institute, Stockholm 17177, Sweden (3)
University of Illinois Chicago, Department of Physiology and Biophysics (2)
The University of Texas MD Anderson Cancer Center (MDACC), Houston, TX 77030, USA (2)
Department of Medical Biochemistry and Biophysics, Karolinska Institute, Stockholm, Sweden (2)
Division of Physiological Chemistry I, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, 171 65 Stockholm, Sweden (2)
Institute of Molecular Medicine and Experimental Immunology, BMZ-II, Building 12, University Hospital Bonn (2)
Department of Neuroscience, University of Florida (2)
Department of Biochemistry and Molecular Biology; and Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, VIC 3010. Australia (2)
Harvard Medical School, Department of Cell Biology (2)
Novo Nordisk Foundation Center for Protein Research (lab head) (1)
V. L. Talrose Institute for Energy Problems of Chemical Physics, N. N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, 119334 Moscow, Russia (1)
The Solomon H. Snyder Department of Neuroscience Johns Hopkins University School of Medicine USA (1)
Princeton University, Molecular Biology Department, USA (1)
University of Lausanne Department of Plant Molecular Biology (DBMV) UNIL-Sorge, Biophore Building CH-1015 Lausanne Switzerland (1)
The Babraham Institute, Babraham Research Campus, Cambridge, UK (1)
Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo (1)
Centre for Gene Regulation and Expression, University of Dundee (1)
Helmholtz Zentrum München, Institute of Lung Biology and Disease, Member of the German Center for Lung Research (DZL), Munich, Germany (1)
Institute of Translational Medicine, Zhejiang Key Laboratory of Frontier Medical Research on Cancer Metabolism, School of Medicine, Zhejiang University, Zhejiang, China. (1)
Cell Signaling and Clinical Proteomics Group, Biocruces Bizkaia Health Research Institute, 48903 Barakaldo (Spain) (1)
Queensland Brain Institute, Univerisity of Queensland (1)
Johns Hopkins University, Chemistry (1)
Leibniz Institute on Aging – Fritz Lipmann Institute (FLI), Beutenbergstrasse 11, 07745 Jena, Germany (1)
Institute of Inflammation and Repair Manchester Institute of Biotechnology University of Manchester (1)
Department of Biochemistry and Pharmacology, The University of Melbourne, VIC 3010. Australia; Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, VIC 3010. Australia (1)

IsPrivate

False (2)

Study type

Transcription profiling by array (70)
ChIP-chip by tiling array (10)
RNA-seq of coding RNA (5)
Animal - One-color microarray (2)
ChIP-seq (2)
Unknown experiment type (1)
RNAi profiling by array (1)

Release Date

2022 (258)
2025 (250)
2023 (238)
2024 (218)
2021 (218)
2020 (176)
2019 (136)
2018 (111)
2017 (88)
2016 (85)
2015 (81)
2014 (81)
2013 (80)
2012 (62)
2010 (60)
2011 (52)
2009 (51)
2026 (48)
2008 (39)
2007 (32)
2006 (15)
2005 (10)
2004 (10)
2002 (3)
2001 (3)
2000 (3)
1999 (2)
1991 (1)

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Protein-metabolite interactomics of carbohydrate metabolism reveal regulation of lactate dehydrogenase

Metabolic networks are interconnected and influence diverse cellular processes. The protein-metabolite interactions that mediate these networks are frequently low affinity and challenging to systematically discover. We developed mass spectrometry integrated with equilibrium dialysis for the disco...

2023-08-07 | MTBLS7237 | MetaboLights

Ion-based Proteome Integrated Solubility Alteration Assay for System-wide Profiling of Protein-Molecule Interactions - full curve data

Unbiased drug target engagement deconvolution and mechanism of action elucidation are major challenges in drug development. Modification-free target engagement methods, such as thermal proteome profiling, have gained increasing popularity over the last several years. However, these methods have limi...

ORGANISM(S): Homo sapiens (Human)

2022-06-09 | PXD033081 | Pride

Increased protein solubility contributes to heat priming of the plant pathogenic fungus Botrytis cinerea

PRJNA894188 | ENA

Proteome solubility changes under different proteostasis stresses

The accumulation of aberrant protein aggregates in neurodegenerative diseases is associated with a widespread failure of the protein homeostasis system. To investigate whether there is a subproteome that consistently aggregates under stress and define the broader determinants for protein aggregation...

ORGANISM(S): Mus musculus (Mouse)

2020-01-29 | PXD014420 | Pride

Proteome solubility Proteomics Stress response Proteostasis

Supercharging-Enhanced nDIA-MS Enables Global Profiling of Drug-Induced Proteome Solubility Shifts (solubility proteomics)

Mass spectrometry (MS)-based proteomics has become indispensable for high-throughput quantitation of protein expression. However, protein function is regulated by a variety of factors beyond abundance alone. Here, we optimized narrow-window, data-independent ac-quisition (nDIA) MS with 3% DMSO as a ...

ORGANISM(S): Homo sapiens (Human)

2026-01-12 | PXD064185 | Pride

Ml-792 Proteome Solubility shift Mg132

Protein solubility changes in mouse serum during aging

ORGANISM(S): Mus musculus (Mouse)

2026-02-23 | PXD057320 | Pride

Protein solubility insolubilome proteostasis aging protein quality control mouse.

Protein solubility changes in mouse cerebellum during aging

ORGANISM(S): Mus musculus (Mouse)

2026-02-23 | PXD057314 | Pride

Protein solubility insolubilome proteostasis aging protein quality control mouse.

Protein solubility changes in mouse neocortex during aging.

ORGANISM(S): Mus musculus (Mouse)

2026-02-23 | PXD057311 | Pride

Protein solubility insolubilome proteostasis aging protein quality control mouse.

Protein solubility changes in mouse hippocampus during aging

ORGANISM(S): Mus musculus (Mouse)

2026-02-23 | PXD057313 | Pride

Protein solubility insolubilome proteostasis aging protein quality control mouse.

Protein solubility changes in mouse tibialis anterior during aging

ORGANISM(S): Mus musculus (Mouse)

2026-02-23 | PXD057317 | Pride

Protein solubility insolubilome proteostasis aging protein quality control mouse.

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2770 Results

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