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GenomicsProteome-wide identification of the druggable CRBN interactome
Proteome-wide identification of the druggable CRBN interactome
PRJNA1271326 | ENA
GenomicsProteome-wide effects of single gene perturbations in a eukaryotic cell
Proteome-wide effects of single gene perturbations in a eukaryotic cell
PRJNA704928 | ENA
ProteomicsOptimized parameter settings enhance proteome-wide formation of crosslinks on low-abundant proteins
Studies using crosslinking coupled to mass spectrometry on the proteome-wide level have spurred great interest as they facilitate structural probing of protein interactions in living cells or even organisms. Here we show, by using both an in-vitro mimic of a crowded cellular environment and eukaryot...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2020-02-17 | PXD014759 | Pride
Proteome-wide xl-ms Reaction kinetics 
GenomicsProteome-wide determinants of co-translational chaperone binding in bacteria
Proteome-wide determinants of co-translational chaperone binding in bacteria
PRJNA1238275 | ENA
ProteomicsProteome-wide cross-linking mass spectrometry of human K562 cells
Proteome-wide cross-linking mass spectrometry was performed on human K562 cell lysates. MS2-MS3 fragmentation strategy was used to aquire the XL-MS data. The raw files in this dataset are a subset of PXD013928.
ORGANISM(S): Homo sapiens (Human) 
2020-07-01 | PXD018771 | Pride
Human Protein-protein Cross-linking mass spectrometry Proteome-wide Interaction 
UnknownProfiling the proteome-wide selectivity of diverse electrophiles.
Not available
S-EPMC12580327 | biostudies-literature
GenomicsEffect of heat-shock on transcriptome- and proteome-wide stress responses of human IMR-90 fibroblasts in different proliferation states.
Effect of heat-shock on transcriptome- and proteome-wide stress responses of human IMR-90 fibroblasts in different proliferation states.
PRJNA1314229 | ENA
Proteomics4D-diaXLMS: Proteome-wide Four-Dimensional Data-Independent Acquisition Workflow for Cross-linking Mass Spectrometry
Cross-linking Mass Spectrometry (XL-MS) is a powerful tool for examining protein structures and interactions. Nevertheless, anal-ysis of low-abundance cross-linked peptides is often limited in data-dependent acquisition (DDA) mode due to its semistochastic nature. To address this issue, we introduce...
ORGANISM(S): Homo Sapiens Saccharomyces Cerevisiae 
2023-06-26 | PXD043282 |
ProteomicsFAIRE-MS reveals mitotic retention of transcriptional regulators on a proteome-wide scale
FAIRE-MS reveals mitotic retention of transcriptional regulators on a proteome-wide scale
ORGANISM(S): Homo Sapiens 
2022-04-11 | PXD033135 |
ProteomicsA Two-dimensional Fractionation Method for Proteome-wide Cross-linking Mass Spectrometry Analysis
Proteome-wide Cross-linking mass spectrometry on HEK 293 cell lysate
ORGANISM(S): Homo sapiens (Human) 
2024-10-10 | PXD029748 | Pride
Cross-linking mass spectrometry Human 
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