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TranscriptomicsRNAi of TbNMD3 in procyclic form Trypanosoma brucei lines
A procyclic form Trypansome brucei RNAi line (PTT parental line, transfected with pALC14 incorporating a TbNMD3 gene fragment) capable of inducing depletion of TbNMD3 was analysed for mRNA expression by RNAseq Cells were grown for 72 hours in culture; RNAi was induced in cells by the addition of 1 m...
ORGANISM(S): Trypanosoma brucei brucei 
2015-04-28 | E-GEOD-67246 | biostudies-arrayexpress
ProteomicsProteomic Analysis of the Peroxisomal Retrograde Signaling in C. elegans
While retrograde signalling pathways have been identified for several organelles, the existence of such a pathway for peroxisomes remains elusive. We identified a peroxisomal retrograde signalling (PRS) in C. elegans, which is activated in response to peroxisomal import stress. We analyzed the PRS u...
ORGANISM(S): Caenorhabditis elegans 
2021-01-11 | PXD014720 | Pride
C. elegans Peroxisome Tag-208(rnai) Prs Prx-5(rnai) 
GenomicsPeroxisomal retrograde signaling in C. elegans
Peroxisomal retrograde signaling in C. elegans
PRJNA657442 | ENA
UnknownHLH-30-dependent rewiring of metabolism during starvation in C. elegans.
Not available
S-EPMC8045935 | biostudies-literature
TranscriptomicsEphA6 promotes angiogenesis and prostate cancer metastasis and is associated with human prostate cancer progression
Purpose: Metastasis remains the primary cause of prostate cancer (CaP) related death. Here, we investigate the molecular, pathologic, and clinical outcome associations of EphA6 expression and its role in CaP progression and metastasis.Experimental Design: The gene expression profiling of Eph recepto...
ORGANISM(S): Homo sapiens 
2015-02-27 | E-GEOD-66335 | biostudies-arrayexpress
TranscriptomicsWing disc transcriptomic variation from 32 Drosophila genetic reference panel (DGRP) lines selected for a broad range of wing sizes
We performed RNA sequencing of wing discs at the wandering L3 larval stage from 32 inbred lines of Drosophila genetic reference panel (DGRP) that consists of 16 big and 16 small wing lines. We aimed to understand system-wide gene regulatory mechanisms that attain the observed natural variation in wi...
ORGANISM(S): Drosophila melanogaster 
2019-02-18 | E-MTAB-7662 | biostudies-arrayexpress
TranscriptomicsBinding site analysis and identification of reciprocal targeting of Dom-A and Xbp1 in Drosophila melanogaster
The DOM-A complex regulates cell growth and proliferation in Drosophila. Analogous to the mammalian Tip60–p400 complex, DOM-A integrates two epigenetic effectors: a SWR1-type ATPase (Domino-A) that mediates histone exchange and the Tip60/KAT5 acetyltransferase. We identified Xbp1, a conserved transc...
ORGANISM(S): Drosophila melanogaster 
2025-10-20 | E-MTAB-15796 | biostudies-arrayexpress
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