Pull-down assay

Show results for

Unknown (1635)
Proteomics (297)
Transcriptomics (267)
Genomics (188)
Other (4)
Metabolomics (3)
Genomic (1)
Methylation profiling (1)
Multiomics (1)

Organisms

Homo sapiens (161)
Mus musculus (112)
Drosophila melanogaster (55)
Danio rerio (18)
Arabidopsis thaliana (9)
Escherichia coli (8)
Saccharomyces cerevisiae (6)
Thermus thermophilus HB8 (4)
Apis mellifera (4)
Rattus norvegicus (4)
Anopheles gambiae (3)
Pseudomonas putida (3)
Mus musculus x Mus spretus (2)
Fragilariopsis cylindrus (2)
Trypanosoma brucei (2)
Synechocystis sp. PCC 6803 (2)
Saccharomyces cerevisiae BY4741 (1)
Aplysia californica (1)
Francisella tularensis subsp. tularensis SCHU S4 (1)
Escherichia coli O157:H7 (1)
Macaca mulatta (1)
Trypanosoma cruzi (1)
Chlamydomonas reinhardtii (1)
synthetic construct (1)
Xenopus laevis (1)
Bacillus cereus (1)
Zea mays (1)
Pseudomonas aeruginosa PAO1 (1)
Caenorhabditis elegans (1)
Pseudomonas aeruginosa (1)

Organisms

Homo sapiens (43)
Mus musculus (16)
Campeiostachys nutans (2)
Arabidopsis thaliana (2)
Clostridioides difficile (1)
Pseudomonas putida (1)

Repository

biostudies-arrayexpress (317)
pride (237)
ENA (79)
geo (50)
iProX (31)
MassIVE (15)
EGA (14)
jPOST (13)
MetaboLights (2)
dbGaP (1)
GNPS (1)
PeptideAtlas (1)

Tissue

Cell culture (77)
Epithelial cell (39)
Brain (11)
Colon (10)
HeLa cell (10)
Permanent cell line cell (9)
HCT-116 cell (8)
B cell (6)
Liver (6)
Plant cell (6)
Skin (6)
Whole body (5)
Blood plasma (4)
Cell suspension culture (4)
Hepatocyte (4)
Kidney (4)
Leaf (4)
Macrophage (4)
Embryo (3)
Fibroblast (3)
Heart (3)
Lung (3)
Blood cell (2)
Early embryonic cell (2)
Embryonic stem cell (2)
Epithelial cell of cervix (2)
Keratinocyte (2)
Melanocyte (2)
Myoblast (2)
Others (1)

Disease

Breast cancer (9)
Colon cancer (8)
Cervix carcinoma (7)
Disease free (6)
Type 2 diabetes mellitus (4)
Acute leukemia (3)
Amyotrophic lateral sclerosis (3)
Malignant neoplasm of ovary (3)
Wounds and Injuries (3)
NA (2)
Normal (2)
Cardiovascular system disease (2)
Melanoma (2)
Neuroblastoma (2)
Obesity (2)
Not applicable (1)
Rheumatoid arthritis (1)
Hyperglycaemic (1)
Neurological disease (1)
Abnormal homeostasis (1)
Alzheimer's disease (1)
Bacterial infectious disease (1)
Bone cancer (1)
Brain cancer (1)
Chronic lymphocytic leukemia (1)
Endocervical adenocarcinoma (1)
Esophageal carcinoma (1)
Frontotemporal dementia (1)
Glioblastoma (1)
Huntington Disease (1)

Technology Type

Mass Spectrometry (237)
Shotgun proteomics (83)
Affinity purification coupled with mass spectrometry proteomics (78)
Bottom-up proteomics (40)
Gel-based experiment (38)
Data-dependent acquisition (32)
Data-independent acquisition (8)
Chemical cross-linking coupled with mass spectrometry proteomics (7)
Top-down proteomics (7)
SWATH MS (6)
Illumina HiSeq 2000 (5)
Affinity proteomics (4)
RNA mass spectrometry (3)
Mass spectrometry (2)
Illumina MiSeq (1)
DiaPASEF (1)
Glycoproteomics (1)
HDMSE (1)
SRM/MRM (1)

Instrument Platform

NextSeq 500 (19)
Illumina HiSeq 2500 (15)
Illumina HiSeq 2000 (15)
Illumina NovaSeq 6000 (9)
Illumina HiSeq 4000 (5)
Illumina MiSeq (4)
Q Exactive (3)
LTQ (3)
Qubit (2)
HiSeq X Ten (2)
Orbitrap Eclipse (2)
Orbitrap Fusion Lumos (2)
TripleTOF 6600 (2)
Sequel IIe (1)
PromethION (1)
Covaris (1)
Covaris S220 (LGC Genomics GmbH), Bioanalyseur 2100 (Agilent), Bravo Platform (Agilent) (1)
Axon GenePix4000B (1)
Model-G2505B US23502366 (1)
Bioanalyzer (1)
Covaris S220, Covaris LE220 (1)
G2565AA DNA microarray scanner [Agilent] (1)
ScanArray Express HT [PerkinElmer] (1)
GenePix 4000B [Axon Instruments] (1)
Illumina Genome Analyzer II (1)
DNBSEQ-G400 (1)
Illumina HiSeq 1500 (1)
NextSeq 550 (1)
Illumina HiSeq 3000 (1)
6490 Triple Quadrupole LC/MS (1)

Publication Date

2024 (64)
2023 (63)
2025 (54)
2010 (54)
2026 (51)
2022 (44)
2015 (44)
2014 (39)
2020 (38)
2013 (37)
2016 (34)
2021 (30)
2011 (24)
2012 (22)
2019 (16)
2018 (15)
2017 (12)
2008 (11)
2009 (9)
2006 (5)

UNIPROT ID/AC

A0A024RC46 (1)
A0A087WTX5 (1)
A0A087WUD1 (1)
A0A087WVW2 (1)
A0A087WXI0 (1)
A0A087WYL9 (1)
A0A087X130 (1)
A0A087X1V9 (1)
A0A0A0MR66 (1)
A0A0A0MS07 (1)
A0A0A0MS51 (1)
A0A0B4J220 (1)
A0A0C4DG89 (1)
A0FGR8 (1)
A0FGR8-2 (1)
A0FGR8-6 (1)
A0M8Q6 (1)
A1L170 (1)
A2NUT2 (1)
A4D110 (1)
A4F255 (1)
A5A3E0 (1)
A6NCN2 (1)
A6NHL2 (1)
A6NHQ2 (1)
A6NHR9 (1)
A6NL93 (1)
A6NNZ2 (1)
A7E2Y1 (1)
A8K2U0 (1)

ENSEMBL ID

ENSG00000170477 (1)

CHEBI ID

CHEBI:17521 (2)
CHEBI:16765 (2)
CHEBI:25017 (2)
CHEBI:30838 (2)
CHEBI:16600 (2)
CHEBI:16634 (2)
CHEBI:16119 (2)
CHEBI:28044 (2)
CHEBI:30772 (2)
CHEBI:32805 (2)
CHEBI:27897 (2)
CHEBI:15756 (2)
CHEBI:80723 (1)
CHEBI:31297 (1)
CHEBI:10086 (1)
CHEBI:80541 (1)
CHEBI:31826 (1)
CHEBI:34985 (1)
CHEBI:34983 (1)
CHEBI:1720 (1)
CHEBI:1182 (1)
CHEBI:79694 (1)
CHEBI:79480 (1)
CHEBI:79904 (1)
CHEBI:79869 (1)
CHEBI:31825 (1)
CHEBI:9390 (1)
CHEBI:7776 (1)
CHEBI:4816 (1)
CHEBI:3575 (1)

Metabolite Name

(3beta,4alpha,5alpha)-3-Hydroxy-4-methylcholest-7-ene-4-carboxylic acid (1)
(1S)-1-{(2R,3R,5R)-5-Hydroxy-3-[(3beta,5alpha,13alpha,14beta,17alpha)-3-hydroxy-4,4,14-trimethylandrost-7-en-17-yl]tetrahydro-2-furanyl}-2-methyl-1,2-propanediol (1)
(8alpha,9beta,11beta,14beta,20S,23S,24R)-11,23,24,25-Tetrahydroxydammar-13(17)-en-3-one (1)
1-[(1R,3aS,5aR,5bR,7aR,9S,11aR,11bR,13aR,13bS)-9-Hydroxy-3a-(hydroxymethyl)-5a,5b,8,8,11a-pentamethylicosahydro-1H-cyclopenta[a]chrysen-1-yl]ethanone (1)
Theasapogenol b (1)
(6R)-6-[(1E,3Z,5R,7E,9E,11R,13S,14R,15S)-3-Ethyl-14-hydroxy-5,9,11,13,15-pentamethyl-12-oxo-1,3,7,9-heptadecatetraen-1-yl]-5,6-dihydro-2H-pyran-2-one (1)
E-Tokoferol (1)
Bolandiol dipropionate (1)
(2S)-2-(4-Isobutylphenyl)propanoic acid - L-lysine hydrate (1:1:1) (1)
Yamogenin (1)
(5beta)-14-Hydroxycholest-7-ene-3,6-dione (1)
Metenolone enanthate (1)
10-[(1R,2S)-2-Hexylcyclopropyl]decanoic acid (1)
METHYL OLEATE (1)
(6Z)-17-Methyl-6-octadecenoic acid (1)
Nisobamate (1)
(3beta,5beta,6beta,7alpha,22E,24xi)-5,19-Cycloergost-22-ene-3,6,7-triol (1)
(3beta,6beta,7alpha,22E,24xi)-Ergosta-4,22-diene-3,6,7-triol (1)
(3beta,7beta,22E,24xi)-Ergosta-5,22-diene-3,7,8-triol (1)
(3beta,4alpha,5alpha)-3-Hydroxycholest-7-ene-4-carboxylic acid (1)
(14xi,22R,23R,24S)-22,23-Dihydroxyergost-4-en-3-one (1)
(2S)-2-Aminotridecanoic acid (1)
(3alpha,5beta)-3,17,21-Trihydroxypregnan-20-one (1)
3a,11b,21-Trihydroxy-5b-pregnan-20-one (1)
Drostanolone (1)
(5Z,9alpha,11alpha,13E,15S)-9,11,15-Trihydroxy-15-methylprosta-5,13-dien-1-oic acid (1)
(4aS,8S,8aS)-8-[(3S)-3-Hydroxy-3-methyl-4-penten-1-yl]-4,4,8a-trimethyl-7-methyleneoctahydro-2(1H)-naphthalenone (1)
Acutilol A (1)
(3alpha)-3,20,21-Trihydroxypregnan-11-one (1)
(3alpha,8xi,9xi,10xi,13xi,14xi)-Pregnane-3,11,17,20,21-pentol (1)

First Public Date

2024 (18)
2023 (12)
2025 (8)
2022 (6)
2021 (6)
2020 (6)
2014 (6)
2026 (5)
2017 (4)
2013 (3)
2019 (2)
2018 (2)
2015 (1)

Classification

bacteria (1)

Study type

Transcription profiling by array (80)
ChIP-seq (78)
RNA-seq of coding RNA (63)
ChIP-chip by tiling array (32)
Other (14)
Hi-C (7)
ChIP-chip by array (5)
Cell line - High-throughput sequencing (4)
Methylation profiling by array (4)
Unknown experiment type (3)
Transcription profiling by tiling array (3)
DNA-seq (3)
Methylation profiling by high throughput sequencing (3)
MNase-seq (2)
Animal - High-throughput sequencing (2)
Comparative genomic hybridization by array (2)
RNA-seq of non coding RNA (2)
GRO-seq (1)
High-throughput sequencing (1)
CLIP-seq (1)
MBD-seq (1)
ATAC-seq (1)
RIP-seq (1)
MicroRNA profiling by array (1)
CUT&RUN (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of total RNA (1)

Release Date

2021 (268)
2022 (237)
2023 (203)
2020 (184)
2024 (150)
2025 (106)
2019 (98)
2018 (94)
2016 (80)
2015 (74)
2014 (73)
2010 (66)
2013 (57)
2017 (54)
2011 (54)
2012 (43)
2009 (26)
2008 (21)
2026 (16)
2006 (13)
2007 (12)
2005 (6)
2004 (6)
2001 (4)
2000 (3)
2003 (2)
1999 (1)
1997 (1)

Lab affiliation

University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry (7)
Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany (3)
Biochemistry and Molecular Biology, Michael Smith Laboratories, University of British Columbia, Canada (2)
COI-NDM (University of Oxford) (2)
Department of Chemistry and Biotechnology Tallinn University of Technology Estonia (2)
EDyP (2)
Institute of Dermatology, Chinese Academy of Medical Sciences and Peking Union Medical College, 210042 Nanjing, China. (2)
Institute of Pharmaceutical Sciences University of Graz Humboldtstraße 46/III 8010 Graz Austria (2)
Shanghai Center for Plant Stress Biology, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China. (2)
University of Greifswald, Institute of Microbiology, Department of Microbial Proteomics, Felix-Hausdorff-Str. 8, 17489 Greifswald, Germany (2)
University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry ( lab head ) (2)
1. Department of Pediatrics, David Geffen School of Medicine, University of California, Los Angeles, CA. 2. Neonatal/Congenital Heart Laboratory, Cardiovascular Research Laboratory, David Geffen School of Medicine, University of California, Los Angeles, CA. (1)
1. Microbial and Environmental Genomics, J. Craig Venter Institute, La Jolla, CA 92037, USA 2. Integrative Oceanography Division, Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA 92093, USA (1)
1Department of Chemistry, University of California, Riverside (1)
1Natural Sciences and Engineering, University of South Carolina Upstate, Spartanburg, SC 29303 (1)
ARC Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Australia and Harry Perkins Institute of Medical Research, Perth, Western Australia, Australia (1)
Abramson Family Cancer Research Institute, Department of Cell and Developmental Biology, University of Pennsylvania Perelman School of Medicine, the United States (1)
Andalusian Center for Moelcular Biology and Regenerative Medicine (CABIMER), University of Sevilla, Spain (1)
Andalusian Center for Molecular Biology and Regenerative medicine, CABIMER-US (1)
Associate Professor, Department of Neurology, Yale University School of Medicine (1)
Australian Institute for Microbiology and Infection, University of Technology Sydney, Australia (1)
BRIC-National Centre for Cell Science, Inside Pune Univesrity, Ganeshkhind, Pune, India, 411007 (1)
Bio21 Mass Spectrometry and Proteomics Facility, The University of Melbourne, Parkville, Victoria 3010, Australia (1)
Biochemie der Pflanze, Justus-von-Liebig-Weg 11, 37077 Göttingen (1)
Biologie des interactions hôte-parasite Institut Pasteur (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Science Faculty, Utrecht University, Padualaan 8, 3584 CH Utrecht, the Netherlands, Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, the Netherlands (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, Utrecht 3584 CH, the Netherlands and Netherlands Proteomics Center, Padualaan 8, Utrecht 3584 CH, the Netherlands (1)
Boston College (1)
Cell Biology Department, Harvard Medical School (1)
Cell Signalling and Proteomics Group, Centre for Genomics and Computational Biology, Barts Cancer Institute, Queen Mary University of London, London, EC1M6BQ, UK (1)

Previous page
1 / 240
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 240
Next page

Sort by:

Relevance

Page size

RNA pull down assay of GST-ZFP36L1 (wildtype and mutant)

PRJNA561512 | ENA

mir-154 in mouse lung development - pull-down RNA

PRJNA593006 | ENA

Protein idetification by using DNA pull-down & MS assay

Identification of proteins binding to the promoter of hrpR gene in Pseudomonas syringae using DNA pull-down & MS assay

ORGANISM(S): Pseudomonas syringae pv. actinidiae str. Shaanxi_M228

2021-03-23 | PXD023722 | Pride

RNA pull down experiment for vA-202 (ANAPC1P2) lncRNA

This study aimed to identify protein interaction partners of the lncRNA vA-202 using an RNA pull-down approach followed by mass spectrometry. Biotinylated vA-202 RNA was generated by in vitro transcription incorporating biotin-14-CTP. For each pull-down reaction, 400 µg of whole-cell lysate (in a to...

ORGANISM(S): Homo sapiens (Human)

2026-05-25 | PXD070150 | Pride

Human Rna pull down Orbutrap ms

TcRBP40 pull-down ribonomics

RNA pull-down assay.
For the recombinant protein pull-down assays, 50 M-5g of recombinant His-tag TcRBP40 protein were bound to 100 uL of Ni-NTA resin (Qiagen) overnight at 4M-0C. 100 M-5g of total RNA from epimastigotes were incubated with the bound protein in 500 M-5l EMSA buffer at 4M-0C for 2...

ORGANISM(S): Trypanosoma cruzi

2012-06-30 | E-MEXP-3057 | biostudies-arrayexpress

mir-154 in mouse lung development - pull-down RNA

RNA isolated from MLE12 cells was subjected to a pull down assay with biotinilated miR-154 to enrich for miR-154 target mRNAs

ORGANISM(S): Mus musculus

2020-05-21 | GSE141292 | GEO

Deep sequencing of HetR-bound DNA reveals novel HetR targets in Anabaena sp. strain PCC 7120

We employed chromatin pull-down and deep sequencing to globally identify HetR DNA targets in vivo at 6 hours after fixed-nitrogen deprivation. We identified novel DNA binding targets of tagged HetR-6xHis and defined a consensus HetR binding site from these HetR target sequences. Chromatin pull down ...

ORGANISM(S): Nostoc sp. PCC 7120

2013-10-31 | E-GEOD-51886 | biostudies-arrayexpress

Biotin-poly-dG or dA pull-down assay

The products of the pull-down assay of mouse brain lysate were analyzed by mass spectrometry.

ORGANISM(S): Mus Musculus (mouse)

2025-08-18 | PXD058062 | JPOST Repository

Identification of human plasma proteins binding oxidized phospholipids using pull-down proteomics

Identification of circulating proteins from human plasma binding to oxidized phospholipids using pull-down proteomics. Enrichment of plasma proteins using OxPAPC and PAPC containing biotynilated liposomes. Identification of plasma proteins that inactivate toxic action of OxPLs.

ORGANISM(S): Homo sapiens (Human)

2024-11-06 | PXD055177 | Pride

Oxidized phospolipids Oxidation specific epitopes Human plasma

Facile single-molecule pull-down assay for analysis of endogenous proteins.

Not available

S-EPMC9238377 | biostudies-literature

Previous page
1 / 240
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 240
Next page

Sort by:

Relevance

Page size

2396 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

UNIPROT ID/AC

ENSEMBL ID

CHEBI ID

Metabolite Name

First Public Date

Classification

Study type

Release Date

Lab affiliation

Tags

OmicsDI is part of the ELIXIR infrastructure

Tweets