Pyrococcus furiosus

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Unknown (378)
Genomics (38)
Transcriptomics (21)
Proteomics (12)
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Organisms

Pyrococcus furiosus (20)
Pyrococcus furiosus DSM 3638 (8)
Thermococcus kodakarensis (4)
Haloferax volcanii (3)
Saccharomyces cerevisiae (3)
Methanococcus maripaludis S2 (2)
Pyrodictium abyssi (2)
Methanococcus maripaludis (2)
Thermococcus sp. AM4 (2)
Methanocaldococcus jannaschii (2)
Sulfolobus acidocaldarius (2)
Homo sapiens (2)
Pyrococcus furiosus COM1 (1)
Pyrococcus (1)
Pyrococcus yayanosii (1)
Planococcus halocryophilus (1)
Acetivibrio thermocellus (1)
Thermoplasma acidophilum (1)
Methanomassiliicoccus luminyensis (1)
Methanosphaera stadtmanae (1)
Methanobrevibacter smithii (1)
Methanosarcina mazei (1)
Halobacterium salinarum (1)
Saccharolobus islandicus (1)
Salmonella enterica (1)
Saccharolobus solfataricus P2 (1)
Saccharolobus solfataricus (1)
Pseudomonas aeruginosa (1)
Bacillus subtilis (1)
Escherichia coli (1)

Organisms

Pyrococcus furiosus (11)
Pyrococcus furiosus DSM 3638 (5)
Pyrococcus furiosus COM1 (4)
Escherichia coli str. K-12 substr. MG1655 (1)

Repository

ENA (34)
geo (18)
biostudies-arrayexpress (9)
pride (9)
MassIVE (2)
jPOST (1)

Tissue

Whole body (3)
Permanent cell line cell (2)
Blood platelet (1)
HeLa cell (1)
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Platelet (1)

Technology Type

Mass Spectrometry (9)
Shotgun proteomics (5)
Bottom-up proteomics (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-dependent acquisition (1)
Gel-based experiment (1)
SWATH MS (1)

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Illumina HiSeq 2000 (2)
LTQ Orbitrap (1)
LTQ Orbitrap Velos (1)

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2015 (5)
2025 (5)
2011 (4)
2012 (3)
2026 (3)
2014 (3)
2018 (2)
2010 (2)
2009 (2)
2020 (2)
2022 (2)
2021 (2)
2016 (1)
2007 (1)
2006 (1)
2023 (1)

First Public Date

2013 (5)
2023 (4)
2020 (4)
2014 (4)
2025 (3)
2017 (3)
2015 (3)
2022 (2)
2019 (2)
2018 (2)
2024 (1)
2016 (1)

Classification

bacteria (1)

Modification

15.994915 (2)
57.021464 (2)
-17.026549 (1)
-18.010565 (1)
144.105918 (1)
42.010565 (1)
79.966331 (1)

Study type

Transcription profiling by tiling array (2)
ChIP-seq (2)
Transcription profiling by array (2)
Other (1)
RNA-seq of coding RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2014 (25)
2018 (23)
2025 (23)
2016 (21)
2015 (21)
2024 (18)
2017 (18)
2012 (17)
2019 (17)
2013 (16)
2020 (15)
2008 (15)
2011 (14)
2009 (14)
2021 (14)
2007 (14)
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2005 (10)
2010 (9)
2006 (9)
2001 (9)
1999 (7)
2000 (6)
1998 (6)
2003 (5)
2026 (4)
2004 (4)
2002 (4)
1997 (4)

Lab affiliation

Bioanalytical Mass Spectrometry Group Max Planck Institute for Multidisciplinary Sciences Germany Bioanalytics Institute for Clinical Chemistry University Medical Center Goettingen Germany (1)
Bioanalytik (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States (1)
Department of Medical Protein Research, VIB, Ghent, Belgium Department of Biochemistry, Ghent University, Ghent, Belgium (1)
Departments of Pediatrics and Immuno-Oncology, Beckman Research Institute, City of Hope National Medical Center, Duarte CA 91010 (1)
Max Planck Institute of Biochemistry, Germany (1)
State Key Laboratory of Microbial Technology, Microbiology and Biotechnology Institute, Shandong University (1)
University Medical Center Goettingen, Department of Clinical Chemistry, Core Facility Proteomics, Göttingen, Germany (1)

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Pyrococcus furiosus

Pyrococcus furiosus psiRNAs

PRJNA117257 | ENA

Pyrococcus furiosus COM1

Pyrococcus furiosus COM1 Genome Sequencing

PRJNA163827 | ENA

Heat and Cold Shock Response in Pyrococcus furiosus

We designed an experimental setup to investigate the transcriptomic and proteomic responses of the hyperthermophilic archaeon Pyrococcus furiosus to heat and cold shock. P. furiosus is a model organism for studying microbial adaptation to extreme environments, including deep-sea hydrothermal vents ...

ORGANISM(S): Pyrococcus furiosus

2023-10-11 | PXD041262 | Pride

Pyrococcus furiosus psiRNAs

Small RNA Sequencing from Pyrococcus furiosus Keywords: Small RNA Analysis Analysis of Small RNA from one sample of Pyrococcus furiosus

ORGANISM(S): Pyrococcus furiosus

2009-12-28 | E-GEOD-16968 | biostudies-arrayexpress

Pyrococcus furiosus COM1

Pyrococcus furiosus COM1 methylation detection - COM1 epigenomics

PRJNA409778 | ENA

Pyrococcus furiosus COM1

Pyrococcus furiosus COM1 methylation detection - COM1 epigenomics

PRJNA410434 | ENA

Pyrococcus furiosus strain:JFW02

Pyrococcus furiosus strain:JFW02 Targeted Locus (Loci)

PRJNA401002 | ENA

Pyrococcus furiosus

Pyrococcus furiosus crRNAs associated with the Cas RAMP module complex

PRJNA149041 | ENA

Genome-wide binding analysis of the transcriptional regulator TrmBL1 in Pyrococcus furiosus

The transcriptional regulator TrmBL1 from the hyperthermophilic euryarchaeon Pyrococcus furiosus functions as repressor as well as activator of genes encoding enzymes mainly involved in sugar uptake, glykolysis and gluconeogenesis. The aim of this study was to explore the genome-wide binding sites o...

ORGANISM(S): Pyrococcus furiosus DSM 3638

2016-01-13 | E-MTAB-3959 | biostudies-arrayexpress

Pyrococcus furiosus DSM 3638 growth curve, tiling arrays

Experimentally mapped transcriptome structure of Pyrococcus furiosus DSM 3638 by hybridizing total RNA (including RNA species <200 nt) to genome-wide high-density tiling arrays (60 mer probes tiled every 16 nt). Pyrococcus furiosus DSM 3638 growth curve experiments were conducted in batch culture. R...

ORGANISM(S): Pyrococcus furiosus DSM 3638

2011-06-27 | E-GEOD-26778 | biostudies-arrayexpress

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