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TranscriptomicsNext Generation Sequencing Facilitates Quantitative Analysis of Wild Type and fl4 mutant Transcriptomes
Analysis of gene expression level. The hypothesis tested in the present study was that fl4 mutant influence the ER stress pathway. Results provide important information of the gene expression level regulation of different ER stress pathways and apoptosis Endosperm mRNA profiles of 19DAP wild type (...
ORGANISM(S): Zea mays 
2014-01-18 | E-GEOD-54184 | biostudies-arrayexpress
TranscriptomicsNext Generation Sequencing Facilitates Quantitative Analysis of Wild Type and rea1 mutant Transcriptomes
Analysis of gene expression level. The hypothesis tested in the present study was that rea1 mutant influence the expression of translation and nucleosome assembly associated genes. Results provide important information of the gene expression level regulation of ribosome proteins, elongation factors...
ORGANISM(S): Zea mays 
2015-04-25 | E-GEOD-67080 | biostudies-arrayexpress
TranscriptomicsNext Generation Sequencing Facilitates Quantitative Analysis of Wild Type and rea1 mutant total and polysome-bound Transcriptomes
Analysis of gene expression level. The hypothesis tested in the present study was that rea1 mutant influence the translation level of translation and nucleosome assembly associated genes. Results provide important information of the gene translation level regulation of ribosome proteins, elongation...
ORGANISM(S): Zea mays 
2015-04-25 | E-GEOD-67083 | biostudies-arrayexpress
TranscriptomicsNext Generation Sequencing Facilitates Quantitative Analysis of Wild Type and opaque2 mutant Transcriptomes
Analysis of gene expression level. The hypothesis tested in the present study was that opaque2 mutant influence the expression of storage proteins. Results provide important information of the gene expression level regulation of storage proteins and other biological processes. Endosperm mRNA profil...
ORGANISM(S): Zea mays 
2014-10-15 | E-GEOD-61830 | biostudies-arrayexpress
TranscriptomicsExpression data from transgenic rice with OsEATB
Rice ethylene-response AP2/ERF factor OsEATB restricts internode elongation by down-regulating gibberellin biosynthetic gene Leaf tissues of 4-leaf-old transgenic and nontransgenic seedlings (10 plants each), respectively, were selected.
ORGANISM(S): Oryza sativa 
2011-07-01 | E-GEOD-28229 | biostudies-arrayexpress
TranscriptomicsExpression data from FCA-csRRM2 transgenic B. napus
Over-expression of a conserved RRM domain (csRRM2) improves Brassica napus yield components by regulating cell size Leaf tissues of one-month-stage transgenic and nontransgenic seedlings (3 plants each),respectively,were selected.
ORGANISM(S): Brassica napus 
2011-11-01 | E-GEOD-32167 | biostudies-arrayexpress
TranscriptomicsSuppressed 60S ribosome exportation in maize ribosome export associated 1 mutant triggers inconsistent transcriptional and translational regulations
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Zea mays 
2015-04-25 | E-GEOD-67103 | biostudies-arrayexpress
TranscriptomicsNext Generation Sequencing Facilitates Quantitative Analysis of Wild Type and dek35 mutant Transcriptomes
Analysis of gene expression level. The hypothesis tested in the present study was that dek35 mutant influence the expression of mitochondrial oxidative phosphorylation associated genes. Results provide important information of the gene expression level regulation of mitochondrial complexes assembly...
ORGANISM(S): Zea mays 
2016-03-25 | E-GEOD-79583 | biostudies-arrayexpress
Genomicsena-DATASET-MDACC-Yale-15-01-2015-22:06:45:013-91 - samples
To examined the reproducibility of nucleotide variant calls in replicate sequencing experiments of the same genomic DNA, we performed targeted sequencing of all known human protein kinase genes (kinome) (~3.3 Mb) using the SOLiD v4 platform. This data set contains 17 breast cancer samples that were ...
EGAD00001001209 | EGA
GenomicsReproducibility of variant calls in replicate next generation sequencing experiments
In this study, we examined the reproducibility of nucleotide variant calls in replicate sequencing experiments of the same genomic DNA. We performed targeted sequencing of all known human protein kinase genes (kinome) (~3.3 Mb) using the SOLiD v4 platform. Seventeen breast cancer samples were sequen...
EGAS00001000826 | EGA
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