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TranscriptomicsChimeric RNA profiling demonstrates an association of alveolar rhabdomyosarcoma with specific stages of normal myogenesis
Total RNA extracted from differentiated mesenchymal stem cells at four time points (T1,T2,T3,T4) and sequenced using Illumina Hi-seq 2000 platform to generate RNA sequencing with 101bp in read length. Nearly 50 million raw reads were yielded from each sample respectively. We used FastQC to confirm t...
ORGANISM(S): Homo sapiens 
2016-02-09 | E-GEOD-64032 | biostudies-arrayexpress
TranscriptomicsDiscovery of cis-spliced chimeric RNAs between adjacent genes in human prostate cells
Total RNA extracted from prostate cancer LNCaP cells transfected with siRNA against CTCF(siCTCF), or negative control siRNA (si-)were processed, and sequenced by two different companies using Illumina Hi-seq 2000 platform to generate RNA sequencing with two output sequences: paired-end 50bp and 101b...
ORGANISM(S): Homo sapiens 
2015-02-09 | E-GEOD-63487 | biostudies-arrayexpress
ProteomicsChloroplast proteomics of wheat under drought
Perturbance of chloroplast proteins is a major cause of photosynthesis inhibition under drought stress. Exogenous application of 5-aminolevulinic acid (ALA) mitigates the damages caused by drought stress protecting plant growth and development, but the regulatory mechanism behind was still obscure. ...
ORGANISM(S): Triticum Aestivum 
2018-12-10 | PXD017528 |
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