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ProteomicsRadical footprinting in mammalian whole blood
Hydroxyl Radical Protein Footprinting (HRPF) is a powerful tool to probe protein higher-order structure, as well as protein-protein and protein-carbohydrate interactions. It is mostly performed in vitro, but recent advances have extended its use to live cells, nematodes, and 3D cultures. However, ap...
ORGANISM(S): Mus musculus (Mouse) 
2026-01-13 | PXD064571 | Pride
Hrpf Targeted analysis Mouse blood Diabetes mellitus 
TranscriptomicsValidation of a genomic classifier that predicts metastasis following radical prostatectomy in at risk patient population
Purpose: Patients with locally advanced prostate cancer after radical prostatectomy are candidates for secondary therapy. However, this higher risk population is heterogeneous. Many cases do not metastasize even when conservatively managed. Given the limited specificity of pathological features to p...
ORGANISM(S): Homo sapiens 
2014-11-13 | E-GEOD-62116 | biostudies-arrayexpress
UnknownPhoto-ribonucleotide reductase β2 by selective cysteine labeling with a radical phototrigger.
Not available
S-EPMC3252915 | biostudies-literature
UnknownCluster-selective 57Fe labeling of a Twitch-domain-containing radical SAM enzyme.
Not available
S-EPMC10337720 | biostudies-literature
TranscriptomicsGene expression time series of Arabidopsis thaliana Col-0 and rcd1 genotypes in ozone and control
Wild-type Columbia (Col-0) and rcd1-1 seeds were sown on 1:1 peat:vermiculite mixture, stratified for 2 days and grown in controlled environment chambers (Weiss Bio1300; Weiss Gallenkamp, (http://www.weiss-gallenkamp.com/) with 12-h/12-h day/night cycle, temperature 22 C/19 C, relative humidity 70%/...
ORGANISM(S): Arabidopsis thaliana 
2011-06-30 | E-MTAB-662 | biostudies-arrayexpress
UnknownHydroxyl-Radical Reaction Pathways for the Fast Photochemical Oxidation of Proteins Platform As Revealed by 18O Isotopic Labeling.
Not available
S-EPMC6635036 | biostudies-literature
TranscriptomicsProtein-coding and MicroRNA Biomarkers of Recurrence of Prostate Cancer Following Radical Prostatectomy
This SuperSeries is composed of the following subset Series: GSE26022: [Gene Expression Training Set] Protein-coding and MicroRNA Biomarkers of Recurrence of Prostate Cancer Following Radical Prostatectomy GSE26242: [Gene Expression Validation Set] Protein-coding and MicroRNA Biomarkers of Recurrenc...
ORGANISM(S): Homo sapiens 
2011-06-01 | E-GEOD-26367 | biostudies-arrayexpress
TranscriptomicsRadical prostatectomy specimens with and without TMPRSS2:ERG fusion from 139 patients with prostate in a Toronto cohort
Prostate tumors with the gene fusion TMPRSS2:ERG have been reported to have a significantly higher risk of recurrence compared with tumors lacking the fusion. Tumors from 139 patients who underwent radical prostatectomy were analyzed for the expression of 502 cancer-related genes to identify genes d...
ORGANISM(S): Homo sapiens 
2009-10-22 | E-GEOD-18655 | biostudies-arrayexpress
UnknownA radical on the Met-Tyr-Trp modification required for catalase activity in catalase-peroxidase is established by isotopic labeling and site-directed mutagenesis.
Not available
S-EPMC2897066 | biostudies-literature
UnknownMultiplex Chemical Labeling of Amino Acids for Protein Footprinting Structure Assessment.
Not available
S-EPMC9983563 | biostudies-literature
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