Raj K K - OmicsDI

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Unknown (1090)
Proteomics (18)
Transcriptomics (15)
Metabolomics (3)

Organisms

Schizophyllum commune H4-8 (17)
Mycobacterium tuberculosis SP7 (17)
Oryza sativa Japonica Group (17)
Crotalus durissus terrificus (17)
Eriocheir sinensis (17)
Candidatus Endoriftia persephonae (17)
Mycobacterium tuberculosis SP10 (17)
Mycobacterium tuberculosis SP13 (17)
Mycobacterium tuberculosis SP22 (17)
Enterobacter ludwigii (17)
Chlamydomonas reinhardtii (17)
Lama (17)
Pyricularia oryzae P131 (17)
Enterococcus mundtii CRL35 (17)
Pongo pygmaeus (17)
Oncorhynchus tshawytscha (17)
Pseudomonas canadensis (17)
Strongylocentrotus purpuratus (17)
Influenza A virus (A/California/04/2009(H1N1)) (17)
Salmonella enterica subsp. enterica serovar Typhimurium (17)
Homo (17)
Bradyrhizobium diazoefficiens (17)
Streptococcus pyogenes STAB901 (17)
Pseudomonas aeruginosa PAO1H2O (17)
Megoura viciae (17)
Homo sapiens (10)
Anopheles stephensi (2)
Camellia sinensis (1)
Populus balsamifera (1)
Mus musculus (1)

Repository

pride (17)
biostudies-arrayexpress (15)
MetaboLights (2)
GNPS (1)
MassIVE (1)

Tissue

Cell culture (8)
Epithelial cell (3)
Stromal cell (1)
Mesenchymal cell (1)
Seedling (1)
Lymph node (1)
Permanent cell line cell (1)
B cell (1)
Plant cell (1)
Breast (1)
Lung (1)
Pancreas (1)
Brain (1)
Blood plasma (1)

Disease

Breast cancer (2)
Lung non-squamous non-small cell carcinoma (1)
Sodium salt (1)
Chronic lymphocytic leukemia (1)
Lymphoma (1)
Pancreatic ductal adenocarcinoma (1)
Cardiovascular system disease (1)

Technology Type

Mass Spectrometry (17)
Bottom-up proteomics (5)
Shotgun proteomics (5)
DiaPASEF (3)
Affinity purification coupled with mass spectrometry proteomics (3)
Data-independent acquisition (3)
Data-dependent acquisition (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
NMR spectroscopy (1)
Mass spectrometry (1)
Gel-based experiment (1)

Instrument Platform

Illumina Genome Analyzer II (1)
TripleTOF 6600 (1)
LTQ Orbitrap (1)
Bruker (1)
Liquid Chromatography MS - alternating - hilic (1)

Publication Date

2025 (6)
2014 (5)
2022 (5)
2012 (3)
2024 (3)
2015 (2)
2013 (2)
2009 (2)
2026 (2)
2011 (1)
2010 (1)
2006 (1)
2017 (1)
2020 (1)
2018 (1)

CHEBI ID

CHEBI:16449 (2)
CHEBI:32816 (2)
CHEBI:25094 (2)
CHEBI:18237 (2)
CHEBI:25004 (1)
CHEBI:162802 (1)
CHEBI:82725 (1)
CHEBI:23399 (1)
CHEBI:47878 (1)
CHEBI:17165 (1)
CHEBI:62736 (1)
CHEBI:165414 (1)
CHEBI:17844 (1)
CHEBI:137246 (1)
CHEBI:137774 (1)
CHEBI:187508 (1)
CHEBI:90355 (1)
CHEBI:70808 (1)
CHEBI:86468 (1)
CHEBI:28998 (1)
CHEBI:86319 (1)
CHEBI:133083 (1)
CHEBI:89482 (1)
CHEBI:17906 (1)
CHEBI:173055 (1)
CHEBI:5604 (1)
CHEBI:28095 (1)
CHEBI:86369 (1)
CHEBI:9542 (1)
CHEBI:17232 (1)

Metabolite Name

Alanine (2)
Lysine (2)
N-acetyl glycoprotein (1)
Aspartyl-threonine (1)
Hydroxyphenyllactic acid (1)
3-(3-hydroxyphenyl)-3-hydroxypropanoic acid (1)
Brunfelsamidine (1)
N-butyrylglycine (1)
3,4,5-trihydroxy-hexanoic acid (1)
Methylglutaric acid (1)
Solerol (1)
Hydroxycaproic acid (1)
2-ethyl-2-Hydroxybutyric acid (1)
2-oxo-4E-hexenoic acid (1)
8-amino-7-oxo-nonanoic acid (1)
Aspartate-semialdehyde (1)
Formylisoglutamine (1)
C18 sphinganine (1)
4-Methyl-5-(2-phosphoethyl)thiazole (1)
Caproylglycine (1)
Isovalerylsarcosine (1)
Chenodeoxyglycocholic acid (1)
Chenodeoxycholic acid glycine conjugate (1)
Deoxycholic acid glycine conjugate (1)
Aspartylglycosamine (1)
3,5-dinitroguaiacol (1)
Firefly luciferin (1)
Lactose phosphate (1)
Phenylpropiolic acid (1)
N-acetylarylamine (1)

Modification

Not available (1)

Study type

Transcription profiling by array (9)
RNA-seq of non coding RNA (3)
Transcription profiling by SAGE (1)
Comparative genomic hybridization by array (1)
MicroRNA profiling by array (1)

Release Date

2022 (160)
2025 (125)
2021 (122)
2024 (119)
2023 (112)
2020 (83)
2017 (81)
2019 (65)
2018 (48)
2016 (44)
2015 (40)
2014 (30)
2013 (21)
2012 (15)
2011 (12)
2026 (10)
2010 (9)
2009 (6)
2006 (1)
2005 (1)
2000 (1)

Lab affiliation

Department of Cell & Developmental Biology, University of California, San Diego, CA 92093, USA. (3)
Lab Head (2)
Wellcome Trust/ MRC Cambridge Stem Cell Institute & Department of Haematology, Univeristy of Cambridge, Cambridge, UK. (1)
Broad Institute, Dana Farber Cancer Institute (1)
Institute of Biochemistry II University Hospital Building 75 Sandhofstrasse 2-4 60528 Frankfurt am Main Germany (1)
VIB-KU Leuven Center for Cancer Biology (1)
Plant Functional Genomics Lab, Biotechnology Unit, Department of Botany (UGC-Centre of Advance Study), Jai Narain Vyas University, Jodhpur, 342001, India (1)
Biozentrum, University of Basel, 4056 Basel, Switzerland (1)
Calico Life Sciences (1)
Director of Women’s Health Research Women’s Service Line Inova Health System (1)
Senior Scientist, Pharmacology Division, CSIR- Central Drug Research Institute (CDRI), Lucknow-226031, Uttar Pradesh, India. (1)
Aging and Cardiovascular Discovery Center, Lewis Katz School of Medicine, Temple University, Philadelphia, PA 19140, USA (1)
Cancer Research UK Cambridge Institute, University of Cambridge, Robinson Way, Cambridge, CB2 0RE, UK (1)
Department of Cellular & Molecular Medicine, University of California, San Diego, CA 92093, USA. (1)

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HnRNP K mislocalisation is a novel protein pathology of frontotemporal lobar degeneration and ageing and leads to cryptic splicing.

Not available

S-EPMC8423707 | biostudies-literature

Cathepsin K maintains the compartment of bone marrow T lymphocytes in vivo.

Not available

S-EPMC8127559 | biostudies-literature

Whole genome sequence analysis of low-density lipoprotein cholesterol across 246 K individuals.

Not available

S-EPMC12418676 | biostudies-literature

High-throughput virtual screening with e-pharmacophore and molecular simulations study in the designing of pancreatic lipase inhibitors.

Not available

S-EPMC4532172 | biostudies-literature

Selective killing of cancer cells by a small molecule targeting the stress response to ROS

Raj L, Ide T, Gurkar AU, Foley M, Schenone M, Li X, Tolliday NJ, Golub TR, Carr SA, Shamji AF, Stern AM, Mandinova A, Schreiber SL, Lee SW. Nature. 2011 475:231-4. doi: 10.1038/nature10167. PMCID: PMC3316487

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2014-01-27 | MSV000078537 | MassIVE

Single-copy gene based 50 K SNP chip for genetic studies and molecular breeding in rice.

Not available

S-EPMC4481378 | biostudies-literature

Raloxifene, a SERM targets PD-L1: an in-silico study.

Not available

S-EPMC10492081 | biostudies-literature

1H NMR Metabolomics Reveals Association of High Expression of Inositol 1, 4, 5 Trisphosphate Receptor and Metabolites in Breast Cancer Patients

1H NMR is used to detect alterations in metabolites and their linkage to metabolic processes in a number of pathological conditions including breast cancer. Inositol 1, 4, 5 trisphosphate (IP3R) receptor is an intracellular calcium channel known to regulate metabolism and cellular bioenergetics. Its...

2017-07-18 | MTBLS326 | MetaboLights

Factors Influencing the Sex Ratio at Birth in India: A New Analysis based on Births Occurring between 2005 and 2016.

Not available

S-EPMC8049007 | biostudies-literature

Shape based virtual screening and molecular docking towards designing novel pancreatic lipase inhibitors.

Not available

S-EPMC4702031 | biostudies-literature