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TranscriptomicsComparative genomic hybridization of 5 strains of Paxillus filamentosus and 1 strain of Paxillus involutus
Variations in gene content and sequence that could be associated with symbiotic adaptations of the ectomycorrhizal fungus Paxillus involutus were investigated by analyses of strains showing various abilities to form mycorrhiza. Five strains of Paxillus involutus (ATCC 200175, Maj; Nau, Pi01SE, and P...
ORGANISM(S): Paxillus filamentosus 
2006-01-01 | E-MEXP-437 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of strains of Paxillus involutus that show different abilities in formation of ectomycorrhizal associations with birch (Betula pendula)
A microarray analysis was conducted to investigate transcriptional differences between strains of Paxillus involutus that show different abilities in formation of ectomycorrhizal associations with birch (Betula pendula). Our goal was to identify genes that showed differential regulation from compari...
ORGANISM(S): Ectomycorrhizal tissue: Paxillus involutus/Betula pendula 
2004-10-05 | E-MEXP-179 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of parasitic fungus Monacrosporium haptotylum during infection of nematode C. elegans
This investigation was designed to follow the parasitic fungus Monacrosporium haptotylum during infection of the nematode Caenorhabditis elegans. M. haptotylum traps nematodes using a spherical structure called knob, which develops on the apex of a hyphal branch. The advantage of using this species ...
ORGANISM(S): Caenorhabditis elegans 
2008-06-01 | E-MEXP-1247 | biostudies-arrayexpress
TranscriptomicsEndometrial methylome of patients with endometriosis
Alterations in endometrial DNA methylation profile have been proposed as one potential mechanism initiating the development of endometriosis. However, the normal endometrial methylome is influenced by the cyclic hormonal changes and the menstrual cycle phase-dependent epigenetic signature should be ...
ORGANISM(S): Homo sapiens 
2016-02-15 | E-GEOD-73948 | biostudies-arrayexpress
TranscriptomicsEndometrial methylome of patients without endometriosis
Alterations in endometrial DNA methylation profile have been proposed as one potential mechanism initiating the development of endometriosis. However, the normal endometrial methylome is influenced by the cyclic hormonal changes and the menstrual cycle phase-dependent epigenetic signature should be ...
ORGANISM(S): Homo sapiens 
2016-02-15 | E-GEOD-73949 | biostudies-arrayexpress
TranscriptomicsDNA methylome profiling of human tissues identifies global and tissue-specific methylation patterns
Background: DNA epigenetic modifications, such as methylation, are important regulators of tissue differentiation, contributing to processes of both development and cancer. Profiling the tissue-specific DNA methylome patterns will provide novel insights into normal and pathogenic mechanisms, as wel...
ORGANISM(S): Homo sapiens 
2014-02-26 | E-GEOD-50192 | biostudies-arrayexpress
TranscriptomicsRNA-Sequencing Identifies Novel Imprinted Genes in Human Placenta (SNP genotyping)
Fetal health is dependent upon the epigenetic-based regulation of gene expression in placenta. Genomic imprinting is an epigenetic phenomenon common to placenta and refers to the monoallelic expression of a gene in a parental-specific manner. We aimed to detect novel imprinted genes in human placent...
ORGANISM(S): Homo sapiens 
2014-09-01 | E-GEOD-56685 | biostudies-arrayexpress
TranscriptomicsUsing RNA sequencing for identifying gene imprinting and random monoallelic expression in human placenta (RNA-seq)
Given the possible critical importance of placental gene imprinting and random monoallelic expression on fetal and infant health, most of those genes must be identified, in order to understand the risks that the baby might meet during pregnancy and after birth. Therefore, the aim of the current stud...
ORGANISM(S): Homo sapiens 
2014-09-01 | E-GEOD-56524 | biostudies-arrayexpress
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