Rasmussen K K - OmicsDI

OmicsDI

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Unknown (1395)
Proteomics (27)
Transcriptomics (24)
Metabolomics (20)
Genomics (10)
Multiomics (1)

Organisms

Homo sapiens (28)
Mus musculus (15)
Bacillus subtilis subsp. subtilis str. 168 (4)
cellular organisms (2)
Xenopus laevis (2)
Streptococcus thermophilus (1)
Pseudomonas aeruginosa (1)
Architeuthis dux (1)
Drosophila melanogaster (1)
Equus asinus (1)
Saccharomyces cerevisiae (1)
Toxoplasma gondii RH-88 (1)

Repository

biostudies-arrayexpress (27)
pride (22)
MetaboLights (18)
EGA (7)
MassIVE (3)
GNPS (2)
jPOST (2)

Tissue

Blood plasma (3)
Cell culture (2)
Cerebrospinal fluid (2)
Egg (2)
Artery (1)
Blood serum (1)
Brain (1)
Egg cell (1)
Epididymal white adipose tissue (1)
Mantle (1)
Milk (1)
Permanent cell line cell (1)
Saliva (1)
Urine (1)

Disease

With bone lytic lesion (1)
Acute leukemia (1)
Infantile onset (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (22)
Mass spectrometry (14)
Shotgun proteomics (10)
Bottom-up proteomics (5)
Affinity purification coupled with mass spectrometry proteomics (4)
Data-independent acquisition (4)
Mass spectrometry assay (2)
NMR spectroscopy (2)
MSE (2)
CAPILLARY, AB 3730xL Genetic Analyzer (1)
Data-dependent acquisition (1)
Gel-based experiment (1)
SRM/MRM (1)
SWATH MS (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (5)
Q Exactive (4)
Exactive (Thermo Scientific) (4)
Liquid Chromatography MS - positive - hilic (3)
Liquid Chromatography MS - negative - hilic (2)
Orbitrap Fusion (1)
Bruker (1)
LTQ Classic (Thermo Scientific) (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Nuclear Magnetic Resonance (NMR) (1)
ESI-ION-TRAP (1)

Publication Date

2023 (9)
2019 (9)
2015 (8)
2025 (5)
2016 (4)
2014 (4)
2010 (4)
2021 (4)
2024 (4)
2022 (4)
2012 (3)
2017 (3)
2020 (3)
2011 (2)
2008 (2)
2026 (2)
2009 (1)
2007 (1)

CHEBI ID

CHEBI:16737 (5)
CHEBI:16708 (4)
CHEBI:16828 (4)
CHEBI:17368 (4)
CHEBI:28865 (4)
CHEBI:30769 (4)
CHEBI:15603 (3)
CHEBI:15971 (3)
CHEBI:16015 (3)
CHEBI:16196 (3)
CHEBI:16335 (3)
CHEBI:16349 (3)
CHEBI:16359 (3)
CHEBI:16755 (3)
CHEBI:17154 (3)
CHEBI:17203 (3)
CHEBI:17295 (3)
CHEBI:17351 (3)
CHEBI:17509 (3)
CHEBI:17568 (3)
CHEBI:17596 (3)
CHEBI:17895 (3)
CHEBI:18050 (3)
CHEBI:18183 (3)
CHEBI:27781 (3)
CHEBI:34687 (3)
CHEBI:35038 (3)
CHEBI:506227 (3)
CHEBI:64563 (3)
CHEBI:73858 (3)

Metabolite Name

Adenine (4)
Creatinine (4)
Hypoxanthine (4)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (3)
Adenosine (3)
Cholic acid (3)
Inosine (3)
L-Glutamine (3)
L-Histidine (3)
L-Leucine (3)
L-Phenylalanine (3)
L-Proline (3)
L-Tryptophan (3)
L-Tyrosine (3)
Linoleic acid (3)
Myristoleic acid (3)
N-Acetyl-D-glucosamine (3)
Tris(2-butoxyethyl) phosphate (3)
Uracil (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
1-Methyladenosine (2)
1-Palmitoyl-2-hydroxy-sn-glycero-3-phosphoethanolamine (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
2-Thiocytidine (2)
3-Hydroxybutyric acid (2)
3-Hydroxycapric acid (2)
3-Hydroxyisovaleric acid (2)
5-L-Glutamyl-L-alanine (2)
9(10)-EpOME (2)

Modification

Not available (1)

Study type

Transcription profiling by array (16)
Transcription profiling by tiling array (3)
Methylation profiling by high throughput sequencing (2)
RNA-seq of coding RNA (2)
Genotyping by array (1)
Comparative genomic hybridization by array (1)
ChIP-seq (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (164)
2024 (152)
2021 (146)
2023 (137)
2025 (134)
2020 (103)
2018 (80)
2019 (77)
2017 (73)
2015 (69)
2014 (64)
2016 (57)
2012 (35)
2011 (31)
2013 (31)
2026 (17)
2010 (16)
2009 (14)
2008 (8)
2007 (5)
2006 (3)
2002 (2)
2005 (1)
2004 (1)
1999 (1)
1998 (1)

Lab affiliation

Proteomics program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen, Denmark (3)
Aalborg University (2)
Copenhagen University Hospital - Bispebjerg and Frederiksberg Hospital, Copenhagen, Denmark (2)
Protein Analysis Group, Department of Pharmacy, University of Copenhagen, Copenhagen, Denmark (2)
Center for Macroecology, Evolution and Climate, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark. The Bioinformatics Centre, Department of Biology, University of Copenhagen, Copenhagen, Denmark. (1)
Department of Biochemistry and Molecular Biology, University of Southern Denmark, 5230 Odense M, Denmark (1)
Molecular Cancer Research Group, Department of Medical Biology, University of Tromsø – The Arctic University of Norway, 9037 Tromsø, Norway (1)
National Institute of Occupational Health, Pb 8149 Dep, N-0033, Oslo, Norway (1)
Novo Nordisk Foundation Center for Basic Metabolic Research University of Copenhagen Blegdamsvej 3B, 2200-Copenhagen, Denmark (1)
Novo Nordisk Foundation Center for Basic Metabolic Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, DK2200, Copenhagen, Denmark (1)
Novo Nordisk Foundation, Center for Protein Research Faculty of Health and Medical Sciences University of Copenhagen Blegdamsvej 3B, DK-2200 Copenhagen N Denmark (1)
Odense University Hospital, Sdr Boulevard 29, DK-5000 Odense C, Dept Clinical Biochemistry and Pharmacology (1)
Organic Mass Spectrometry Laboratory, Department of Chemical Sciences, University of Catania, Viale A. Doria 6, I-95125 Catania, Italy (1)
Proteomics (1)
University of Copenhagen Faculty of Health and Medical Sciences Novo Nordisk Foundation Center for Protein Research (1)
University of Geneva, Department of Microbiology and Molecular Medicine (1)
University of Greifswald Center of Functional Genomics of Microbes Institute of Microbiology Department of Microbial Proteomics Felix-Hausdorff-Str.8 17489 Greifswald phone: +49 3834 420 5903 fax: +49 3834 420 5902 (1)