Reid J J - OmicsDI

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Unknown (2298)
Proteomics (149)
Transcriptomics (29)
Genomics (18)
Metabolomics (5)
Genomic (1)

Organisms

Homo sapiens (125)
Aerococcus urinae NBRC 15544 = CCUG 36881 (18)
Andropogon gerardi (18)
Bacteria (18)
Bartonella quintana JK 31 (18)
Burkholderia ubonensis MSMB22 (18)
Canis lupus familiaris (18)
Cnidaria (18)
Ectopseudomonas oleovorans CECT 5344 (18)
Ensifer adhaerens (18)
Halictus scabiosae (18)
Human immunodeficiency virus 1 (18)
Mesocricetus auratus (18)
Miscanthus x giganteus (18)
Morchella importuna (18)
Vitis vinifera (3)
Mus musculus (3)
Arabidopsis thaliana (2)
Toxoplasma gondii (2)
Botrytis cinerea (1)
Dictyostelium discoideum (1)
Eimeria tenella (1)
Plasmodium chabaudi chabaudi (1)
Plasmodium falciparum 3D7 (1)
Rattus norvegicus (1)
Neospora caninum (1)
Ancylostoma ceylanicum (1)
Onchocerca volvulus (1)
Sus scrofa (1)
blank sample (1)

Organisms

Neospora caninum (1)
Toxoplasma gondii (1)

Repository

PeptideAtlas (97)
MassIVE (31)
biostudies-arrayexpress (27)
pride (18)
EGA (16)
MetaboLights (4)
iProX (3)
geo (2)
ENA (2)
dbGaP (1)
GNPS (1)

Tissue

Digestive System (95)
Cell culture (8)
Embryonic stem cell (4)
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Cardiomyocyte cell line (1)
Early embryonic cell (1)
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Spleen (1)
Stem cell (1)
Whole body (1)

Disease

Cardiovascular system disease (4)
Breast cancer (2)
Parasitic helminthiasis infectious disease (2)
CAMN (1)
High Grade Ovarian Serous Adenocarcinoma (1)
Disease free (1)
Huntington Disease (1)
Mitochondrial metabolism disease (1)

Technology Type

Mass Spectrometry (18)
Shotgun proteomics (10)
Mass spectrometry (4)
Data-independent acquisition (3)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Bottom-up proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-dependent acquisition (1)
SWATH MS (1)

Instrument Platform

LTQ Orbitrap Velos (109)
Q Exactive (8)
LTQ Orbitrap Elite (3)
Q Exactive Plus (3)
TimsTOF Pro (3)
Illumina HiSeq 2500 (2)
Illumina HiSeq 2000 (2)
NextSeq 500 (2)
LTQ Orbitrap XL (2)
Synapt XS (2)
Liquid Chromatography MS - positive - reverse phase (2)
Liquid Chromatography MS - negative - reverse phase (2)
GenePix 4000B [Axon Instruments] (1)
Illumina NovaSeq 6000 (1)
Q Exactive UHMR (1)
LTQ Velos (1)
Orbitrap Fusion Lumos (1)
Q Exactive HF (1)
TripleTOF 5600 (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2014 (101)
2022 (13)
2019 (12)
2011 (8)
2025 (6)
2017 (5)
2012 (5)
2021 (4)
2023 (4)
2013 (3)
2020 (2)
2018 (2)
2015 (1)
2010 (1)
2009 (1)
2008 (1)
2006 (1)
2024 (1)

UNIPROT ID/AC

A0A024RC46 (97)
A0A087WTX5 (97)
A0A087WVW2 (97)
A0A087WYL9 (97)
A0A087X130 (97)
A0A087X1V9 (97)
A0A0A0MS07 (97)
A0A0A0MS51 (97)
A0A0C4DG89 (97)
A0AVT1 (97)
A0FGR8 (97)
A0FGR8-2 (97)
A0FGR8-6 (97)
A0M8Q6 (97)
A0N5G5 (97)
A2BFH1 (97)
A2IPI2 (97)
A2IPI5 (97)
A2NKM6 (97)
A2NUT2 (97)
A2NXP9 (97)
A4F255 (97)
A5A3E0 (97)
A6NHL2 (97)
A6NNZ2 (97)
A8MTJ3 (97)
B1N7B8 (97)
B2RPK0 (97)
B3KML9 (97)
B3KT93 (97)

ENSEMBL ID

ENSG00000170477 (96)
ENSG00000229353 (49)
ENSG00000147251 (20)
ENSG00000247315 (3)
ENSG00000176092 (2)
ENSG00000204131 (2)

CHEBI ID

CHEBI:16870 (4)
CHEBI:15891 (3)
CHEBI:42111 (2)
CHEBI:18237 (2)
CHEBI:15699 (2)
CHEBI:37550 (2)
CHEBI:16335 (2)
CHEBI:16946 (2)
CHEBI:16010 (2)
CHEBI:73024 (2)
CHEBI:36274 (2)
CHEBI:16704 (2)
CHEBI:16857 (2)
CHEBI:30797 (2)
CHEBI:16919 (2)
CHEBI:15354 (2)
CHEBI:16828 (2)
CHEBI:18344 (2)
CHEBI:140755 (1)
CHEBI:84399 (1)
CHEBI:166733 (1)
CHEBI:186106 (1)
CHEBI:187845 (1)
CHEBI:229496 (1)
CHEBI:60125 (1)
CHEBI:88475 (1)
CHEBI:28115 (1)
CHEBI:145324 (1)
CHEBI:166709 (1)
CHEBI:141071 (1)

Metabolite Name

Sn-glycero-3-phosphocholine (2)
Choline (2)
O-acetylcarnitine (1)
Cervonyl carnitine (1)
Timnodonyl carnitine (1)
Sphingosine-1-phosphate (1)
L-citrulline (1)
O-acetyl-l-serine (1)
FA(8:0) (1)
Glycochenodeoxycholic acid (GCDCA) (1)
Glycocholic acid (GCA) (1)
Glycodeoxycholic acid (GDCA) (1)
Glycolithocholic Acid sulfate (1)
P-Hydroxybenzoic acid (1)
FA(6:0) (1)
Taurochenodeoxycholic Acid (TCDCA) (1)
Taurohyocholic acid (THCA) (1)
Taurolithocholic acid -3-O-sulfate (1)
3a,6a,7a,12a-Tetrahydroxy-5b-cholanoic acid (2a,3a,7a,12a-THBA) (1)
FA(13:0) (1)
Vanillomandelic acid (VMA) (1)
Dioxolithocholic acid (1)
CL(18:2/18:2/18:2/18:1) (1)
Homovanillic acid (HVA) (1)
FA(10:0) (1)
L-homoserine (1)
L-kynurenine (1)
N-Carbamoyl-L-aspartic acid (1)
Linoelaidyl carnitine (1)
LXA4 (1)

First Public Date

2013 (2)

Classification

protozoa (1)

Modification

Not available (1)

Study type

Transcription profiling by array (15)
RNA-seq of coding RNA (9)
Trajectory (1)
Comparative genomic hybridization by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2023 (257)
2021 (248)
2022 (248)
2025 (237)
2024 (208)
2020 (167)
2018 (144)
2019 (141)
2017 (106)
2015 (93)
2016 (83)
2014 (78)
2013 (62)
2011 (50)
2012 (46)
2010 (41)
2009 (33)
2026 (29)
2008 (20)
2007 (11)
2006 (10)
2004 (3)
2003 (3)
2002 (2)
2000 (2)
2005 (1)
2001 (1)
1999 (1)

Lab affiliation

Cardiac Bioengineering group, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia (2)
Melbourne Veterinary School, Faculty of Science, The University of Melbourne, Parkville, Victoria, Australia (2)
Wellcome Centre for Cell-Matrix Research, Division of Cell-Matrix Biology and Regenerative Medicine, School of Biological Sciences, Faculty of Biology Medicine and Health, The University of Manchester, Manchester Academic Health Science Centre, Manchester, UK. (2)
1.Wellcome Centre for Cell-Matrix Research, Division of Cell-Matrix Biology and Regenerative Medicine, School of Biological Sciences, Faculty of Biology Medicine and Health, The University of Manchester, Manchester Academic Health Science Centre, Manchester, UK. (1)
CRUK Beatson Institute (1)
Cardiac Bioengineering Lab, QIMR Berghofer Medical Research Institute, Brisbane, QLD, AUS (1)
Cardiac Bioengineering lab, QIMR Berghofer Medical Research Institute, Herston, QLD, AUD (1)
Department of Biochemistry and Molecular Biology; and Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, VIC 3010. Australia (1)
Department of Medicine, Nephrology and Pharmacological Sciences, Icahn School of Medicine at Mount Sinai (1)
Harry Perkins Institute of Medical Research, QEII Medical Centre, Nedlands, Western Australia 6009, Australia (1)
Imperial College London (1)
Infection Biology (1)
Professor Anthony W Purcell Deputy Head (Research), Department of Biochemistry and Molecular Biology Head Immunoproteomics Laboratory Monash University, Clayton Campus Clayton 3800 Victoria Australia (1)
State Key Laboratory of Genetic Engineering and Collaborative Innovation Center of Genetics and Development, Institute of Plant Biology, School of Life Sciences, Fudan University (1)
The University of Melbourne (1)

Tags

pathogen:protozoan (1)
pathogen (1)

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Nurse navigators in early cancer care: a randomized, controlled trial.

Not available

S-EPMC3867643 | biostudies-literature

Expression and function of the protein tyrosine phosphatase receptor J (PTPRJ) in normal mammary epithelial cells and breast tumors.

Not available

S-EPMC3398958 | biostudies-literature

Associations between blood sex steroid concentrations and risk of major adverse cardiovascular events in healthy older women in Australia: a prospective cohort substudy of the ASPREE trial.

Not available

S-EPMC8896500 | biostudies-literature

15-Epi-LXA₄ and MaR1 counter inflammation in stromal cells from patients with Achilles tendinopathy and rupture.

Not available

S-EPMC6593888 | biostudies-literature

Phylogenetic evidence against evolutionary stasis and natural abiotic reservoirs of influenza A virus.

Not available

S-EPMC2268457 | biostudies-literature

Unusual fragmentation of Pro-Ser/Thr-containing peptides detected in collision-induced dissociation spectra.

Not available

S-EPMC3384711 | biostudies-literature

Physical therapists' use of cognitive-behavioral therapy for older adults with chronic pain: a nationwide survey.

Not available

S-EPMC2716379 | biostudies-literature

RNA-seq analysis of differentiating human erythroblasts

Human erythroblasts purified from cord blood were cultured in vitro and FACS-sorted into five highly purified populations representing distinct differentiation stages: proerythroblasts, early basophilic erythroblasts, late basophilic erythroblasts, polychromatophilic erythroblasts, and orthochromat...

ORGANISM(S): Homo sapiens

2013-12-25 | E-GEOD-53635 | biostudies-arrayexpress

A multistate model of health transitions in older people: a secondary analysis of ASPREE clinical trial data.

Not available

S-EPMC8880962 | biostudies-literature

E-Cigarette Flavors, Devices, and Brands Used by Youths Before and After Partial Flavor Restrictions in the United States: Canada, England, and the United States, 2017‒2020.

Not available

S-EPMC9222458 | biostudies-literature

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2500 Results

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