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TranscriptomicsHfq-coIP overgrowth
The small RNAs associated with protein Hfq constitute one of the largest classes of post-transcriptional regulators known to date. Most previously investigated members of this class are encoded by conserved free-standing genes. Here, deep sequencing of Hfq-bound transcripts from multiple stages of g...
ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 
2012-10-01 | E-GEOD-38884 | biostudies-arrayexpress
TranscriptomicsdRNA-Seq of Chlamydia pneumoniae
The obligate intracellular human pathogen Chlamydia pneumoniae was subjected to dRNA-Seq to gain insights into the transcriptome. The two distinct life cycle forms elementary bodies (EB) and reticulate bodies (RB) were isolated from human Hep2 cell line by differential gradient centrifugation. Total...
ORGANISM(S): Chlamydophila pneumoniae CWL029 
2011-08-18 | E-GEOD-24999 | biostudies-arrayexpress
TranscriptomicsSEA BREAM PATH_INTEST
To determine the effects on the intestine gene expression of pathogen exposure to Enteromyxum leei. One fish group was exposed to E. leei-contaminated effluent (recipient group = R) . R fish (n= 66, average weight = 134 g) were placed in two replicated 200L fibre-glass tanks which were set to receiv...
ORGANISM(S): Sparus aurata 
2010-06-05 | E-GEOD-19646 | biostudies-arrayexpress
UnknownCollaborative Efforts Driving Progress in Pediatric Acute Myeloid Leukemia.
Not available
S-EPMC4567700 | biostudies-literature
UnknownStructure-Function Studies of Hydrophobic Residues That Clamp a Basic Glutamate Side Chain during Catalysis by Triosephosphate Isomerase.
Not available
S-EPMC4934371 | biostudies-literature
TranscriptomicsHigh-Resolution Transcriptome Maps Reveal Strain-Specific Regulatory Features of Multiple Campylobacter jejuni Isolates
Campylobacter jejuni is currently the leading cause of bacterial gastroenteritis in humans. Comparison of multiple Campylobacter strains revealed a high genetic and phenotypic diversity. However, little is known about differences in transcriptome organization, gene expression, and small RNA (sRNA) r...
ORGANISM(S): Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 
2013-05-27 | E-GEOD-38883 | biostudies-arrayexpress
TranscriptomicsRNA-seq of five Populus x canescens (Grey poplar) organs/tissues during periodic or chronic drought-heat stress treatment and after recovery in comparison to untreated controls
Simulating predicted future climate conditions, stress response and stress-related memory after one week of recovery were transcriptionally characterised in young and old leaves, phloem-bark, developing xylem and roots of 3-month-old Grey poplar plants that had undergone three weeks of stress or wer...
ORGANISM(S): Populus tremula x Populus alba 
2019-01-11 | E-MTAB-6121 | biostudies-arrayexpress
TranscriptomicsTranscriptome sequencing and microarray design for functional genomics in the extremophile Arabidopsis relative Thellungiella salsuginea
Arabidopsis thaliana is not particularly stress tolerant and may lack protective mechanisms required to survive extreme environmental conditions. Thellungiella salsuginea has therefore attracted increasing interest as an alternative plant model species that possesses high tolerance of various abioti...
ORGANISM(S): Eutrema salsugineum 
2013-11-19 | E-GEOD-42156 | biostudies-arrayexpress
TranscriptomicsComparative Genomic Hybridization (CGH) reveals sex chromosome location and gene movement in stalk-eyed flies (family Diopsidae), Sphyracephala beccarii
We utilized Comparative Genomic Hybridization (CGH), using probes designed from de novo assembly of a testes transcriptome, to identify genes located on the sex chromosomes and autosomes of a stalk-eyed fly, Sphyracephala beccarii. Analysis of X chromosome gene content revealed the evolution of a ne...
ORGANISM(S): Sphyracephala beccarii 
2015-12-11 | E-GEOD-75873 | biostudies-arrayexpress
TranscriptomicsComparative Genomic Hybridization (CGH) reveals sex chromosome location and gene movement in stalk-eyed flies (family Diopsidae), Teleopsis quinqueguttata
We utilized Comparative Genomic Hybridization (CGH), using probes designed from de novo assembly of a testes transcriptome, to identify genes located on the sex chromosomes and autosomes of a stalk-eyed fly, Teleopsis quinqueguttata. Analysis of X chromosome gene content revealed the evolution of a ...
ORGANISM(S): Teleopsis quinqueguttata 
2015-12-11 | E-GEOD-75872 | biostudies-arrayexpress
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