Ren Fan F - OmicsDI

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Unknown (451)
Proteomics (21)
Transcriptomics (6)
Multiomics (6)
Metabolomics (6)
Genomics (1)

Organisms

Homo sapiens (21)
Zea mays (3)
Caenorhabditis elegans (1)

Repository

pride (13)
biostudies-arrayexpress (6)
MetaboLights (6)
MassIVE (3)
PeptideAtlas (3)
iProX (2)
EGA (1)

Tissue

Liver (6)
Others (3)
Permanent cell line cell (3)
Cell culture (2)
Gastric epithelium (2)
Hepatocyte (2)
B cell (1)
Blood cell (1)
Blood plasma (1)
Epithelial cell (1)
Gastric cancer cell line (1)
Neutrophil (1)

Disease

Hepatocellular carcinoma (2)
Breast cancer (1)
Gastric adenocarcinoma (1)
Gastric signet ring cell adenocarcinoma (1)
Liver cancer (1)
Lymphoma (1)
Severe acute respiratory syndrome (1)

Technology Type

Mass Spectrometry (13)
Mass spectrometry (5)
Shotgun proteomics (4)
Bottom-up proteomics (3)
SWATH MS (2)
NMR spectroscopy (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-dependent acquisition (1)
Data-independent acquisition (1)
SRM/MRM (1)

Instrument Platform

MS:1000031 (3)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
LTQ Orbitrap Elite (2)
Gas Chromatography MS - (1)
Liquid Chromatography MS - alternating - hilic (1)
Nuclear Magnetic Resonance (NMR) - (1)
Xevo G2 QTOF (Waters) (1)
QExactive (1)

Publication Date

2021 (6)
2014 (5)
2013 (4)
2025 (3)
2016 (3)
2009 (2)
2023 (2)
2022 (2)
2019 (2)
2006 (1)
2017 (1)
2026 (1)
2020 (1)

UNIPROT ID/AC

A0A024R563 (3)
A0A024R8H9 (3)
A0A024RAN2 (3)
A0A024RC46 (3)
A0A087WUD1 (3)
A0A087WVZ5 (3)
A0A087WWK8 (3)
A0A087WXI0 (3)
A0A087WZE9 (3)
A0A087X1S3 (3)
A0A0A0MR66 (3)
A0A0A0MS51 (3)
A0A0A0MSA7 (3)
A0A0B4J220 (3)
A0A0C4DG89 (3)
A0A0C4DGT3 (3)
A0AV96 (3)
A0AVT1 (3)
A0FGR8 (3)
A0FGR8-2 (3)
A0FGR8-6 (3)
A0JLT2 (3)
A0JNW5 (3)
A0MZ66 (3)
A0PJW6 (3)
A0PK00 (3)
A1A4S6 (3)
A1L0T0 (3)
A1L170 (3)
A1L390 (3)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000170477 (3)
ENSG00000247315 (3)

CHEBI ID

CHEBI:15891 (3)
CHEBI:15344 (2)
CHEBI:15354 (2)
CHEBI:15971 (2)
CHEBI:16196 (2)
CHEBI:16335 (2)
CHEBI:16384 (2)
CHEBI:16449 (2)
CHEBI:16467 (2)
CHEBI:16643 (2)
CHEBI:16857 (2)
CHEBI:16927 (2)
CHEBI:16995 (2)
CHEBI:17053 (2)
CHEBI:17191 (2)
CHEBI:17203 (2)
CHEBI:17295 (2)
CHEBI:17351 (2)
CHEBI:17596 (2)
CHEBI:18012 (2)
CHEBI:18019 (2)
CHEBI:18050 (2)
CHEBI:18183 (2)
CHEBI:18257 (2)
CHEBI:24848 (2)
CHEBI:25017 (2)
CHEBI:26271 (2)
CHEBI:27266 (2)
CHEBI:27897 (2)
CHEBI:28044 (2)

Metabolite Name

Adenosine (2)
Betaine (2)
Choline (2)
Fumaric acid (2)
Inosine (2)
Leucine (2)
Ornithine (2)
Pantothenic acid (2)
Phenylalanine (2)
Proline (2)
Taurine (2)
Valine (2)
(+/-)-c75 (1)
(+/-)12(13)-DiHOME (1)
(-)-camphor (1)
(-)-caryophyllene oxide (1)
(9cis)-retinal (1)
-alanine (1)
-aspartylphenylalanine (1)
1,3-Diisopropylbenzene (1)
1-aminocyclohexanecarboxylic acid (1)
1-ethoxynaphthalene (1)
1-linoleoyl glycerol (1)
1-methyl-L-histidine (1)
1-methyladenosine (1)
1-methylguanine (1)
1-methylnicotinamide (1)
1-methyluric acid (1)
1-naphthol (1)
1-oleoyl-rac-glycerol (1)

Study type

RNA-seq of coding RNA (4)
Transcription profiling by array (2)

Release Date

2025 (86)
2024 (59)
2021 (54)
2022 (49)
2023 (47)
2020 (37)
2018 (24)
2019 (18)
2015 (16)
2016 (11)
2017 (10)
2026 (9)
2014 (7)
2013 (7)
2009 (7)
2010 (6)
2012 (4)
2006 (2)
2011 (2)
2008 (2)

Lab affiliation

Beijing proteome research center (3)
Clinical Laboratory of BGI Health, BGI-Shenzhen, Shenzhen 518083, China (3)
1Department of Pathology, Dana-Farber/Harvard Cancer Center, PhD Program in Immunology, Harvard Medical School; Department of Laboratory Medicine, Boston Children's Hospital, Enders Research Building, Room 811, Boston, MA, 02115, USA (1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China (1)
Insilico Meidicine Shanghai Ltd. (1)
Moffitt Cancer Center (1)
State Key Laboratory of Proteomics, National Center for Protein Sciences Beijing, 38 Life Science Park Road, Beijing 102206, P.R. China (1)
State Key Laboratory of Proteomics, National Center for Protein Sciences Beijing, 38 Life Science Park Road, Beijing 102206, P.R. China. (1)
Stem Cell Research Center, Ren Ji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, 200127, China (1)

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Research on the Evolution of "Ren" and "Li" in SikuQuanshu Confucian Classics.

Not available

S-EPMC8086831 | biostudies-literature

Succession of Fungal Community during Outdoor Deterioration of Round Bamboo.

Not available

S-EPMC10301112 | biostudies-literature

Fangchinoline exerts antitumour activity by suppressing the EGFR‑PI3K/AKT signalling pathway in colon adenocarcinoma.

Not available

S-EPMC7709815 | biostudies-literature

Proteomic of huh7 grown in normal and glucose-deficient conditions

Tumor cell metabolic plasticity is essential for tumor progression and therapeutic response, but the mechanism for regulation of metabolic plasticity remain poorly explored. Here, we identify PROX1 as an essential determinant for tumor metabolic plasticity. Notably, PROX1 is significantly reduced in...

ORGANISM(S): Homo sapiens (Human)

2022-09-27 | PXD036977 | Pride

The AMP-Activated Protein Kinase (AMPK) Positively Regulates Lysine Biosynthesis Induced by Citric Acid in Flammulina filiformis.

Not available

S-EPMC10057554 | biostudies-literature

Two-Dimensional VO2 Mesoporous Microarrays for High-Performance Supercapacitor.

Not available

S-EPMC5940969 | biostudies-literature

Preparation and Characterization of Screen-Printed Cu₂S/PEDOT:PSS Hybrid Films for Flexible Thermoelectric Power Generator.

Not available

S-EPMC9324872 | biostudies-literature

The Pathogenicity of Fusobacterium nucleatum Modulated by Dietary Fibers-A Possible Missing Link between the Dietary Composition and the Risk of Colorectal Cancer.

Not available

S-EPMC10458976 | biostudies-literature

Protein profiling reveals the characteristic changes of complement cascade pathway in the tissues of gastric signet ring cell carcinoma

Signet ring cell carcinoma (SRCC) is a histological subtype of gastric cancer with distinct features in multiple aspects compared to adenocarcinomas (ACs). Lacking of systematically molecular overview to this disease made a slow progress in its clinical practice. In the present proteomics study, gas...

ORGANISM(S): Homo sapiens (Human)

2021-02-25 | PXD022952 | Pride

Signet ring cell Mass spectrometry Stomach neoplasms Proteomics Complement system proteins

Protein profiling reveals the characteristic changes of complement cascade pathway in the tissues of gastric signet ring cell carcinoma

ORGANISM(S): Homo sapiens (Human)

2021-02-25 | PXD022627 | Pride

Signet ring cell Mass spectrometry Stomach neoplasms Proteomics Complement system proteins

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