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Unknown (4486)
Genomics (718)
Transcriptomics (31)
Proteomics (31)
Models (6)
Metabolomics (3)

Organisms

Mycobacterium tuberculosis SP7 (19)
Mycobacterium tuberculosis SP10 (19)
Mycobacterium tuberculosis SP13 (19)
Mycobacterium tuberculosis SP22 (19)
Saccharomyces cerevisiae (5)
Zymomonas mobilis (3)
Dunaliella tertiolecta (2)
Chlamydomonas moewusii (2)
Saccharum officinarum (2)
Shewanella oneidensis MR-1 (2)
Oryza sativa Japonica Group (2)
Arabidopsis thaliana (2)
Methanothermobacter thermautotrophicus (1)
Methanothermobacter marburgensis str. Marburg (1)
Methanothermobacter thermautotrophicus str. Delta H (1)
Arabidopsis (1)
Populus trichocarpa x Populus deltoides (1)
Populus trichocarpa (1)
Crocosphaera subtropica ATCC 51142 (1)
Thlaspi arvense (1)
Populus tremula x Populus tremuloides (1)
Auxenochlorella protothecoides (1)
Cynara cardunculus (1)
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 (1)
Cellvibrio japonicus (1)
Corynebacterium glutamicum ATCC 13032 (1)
Synechococcus elongatus PCC 7942 = FACHB-805 (1)
Sorghum bicolor (1)
Oryza sativa (1)
Escherichia coli (1)

Organisms

Thlaspi arvense (490)
Eucalyptus grandis (12)
anaerobic digester metagenome (7)
Zymomonas mobilis (5)
Acetivibrio thermocellus ATCC 27405 (3)
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 (3)
Saccharomyces cerevisiae (3)
bioreactor metagenome (3)
Miscanthus lutarioriparius (2)
Zymomonas mobilis subsp. mobilis (2)
Chlorella vulgaris (2)
Populus tremula x Populus tremuloides (2)
sludge metagenome (2)
Bradyrhizobium sp. YR681 (1)
Herbaspirillum sp. YR522 (1)
Pseudomonas sp. GM84 (1)
Pseudomonas sp. GM80 (1)
Pseudomonas sp. GM79 (1)
Pseudomonas sp. GM78 (1)
Pseudomonas sp. GM74 (1)
Pseudomonas sp. GM67 (1)
Pseudomonas sp. GM60 (1)
Pseudomonas sp. GM55 (1)
Pseudomonas sp. GM50 (1)
Pseudomonas sp. GM49 (1)
Pseudomonas sp. GM48 (1)
Pseudomonas sp. GM41(2012) (1)
Pseudomonas sp. GM33 (1)
Pseudomonas sp. GM25 (1)
Pseudomonas sp. GM24 (1)

Repository

ENA (716)
geo (20)
pride (19)
biostudies-arrayexpress (13)
MassIVE (11)
BioModels (6)
MetaboLights (2)
GNPS (1)
PanoramaPublic (1)

Tissue

Stem (2)
Plant cell (1)
Prokaryotic cell (1)
Cell suspension culture (1)
Permanent cell line cell (1)
Cell culture (1)

Technology Type

Mass Spectrometry (19)
Shotgun proteomics (8)
Bottom-up proteomics (7)
Data-independent acquisition (3)
Mass spectrometry (2)
Data-dependent acquisition (2)
Metaproteomics (1)
Affinity proteomics (1)
SWATH MS (1)
Gel-based experiment (1)

Instrument Platform

Q Exactive Plus (4)
Q Exactive (2)
Q Exactive HF (2)
Orbitrap Fusion Lumos (2)
G2565AA DNA microarray scanner [Agilent] (1)
LTQ Orbitrap Velos (1)
LTQ Orbitrap Elite (1)
Gas Chromatography MS - (1)
Xevo G2 QTOF (Waters) (1)

Publication Date

2024 (13)
2025 (8)
2014 (7)
2026 (6)
2015 (6)
2010 (6)
2012 (4)
2022 (4)
2021 (4)
2023 (3)
2013 (2)
2020 (2)
2016 (2)
2009 (2)
2019 (2)
2008 (1)
2018 (1)

CHEBI ID

CHEBI:62890 (3)
CHEBI:139151 (3)
CHEBI:85106 (3)
CHEBI:40356 (3)
CHEBI:67138 (3)
CHEBI:64076 (3)
CHEBI:64074 (3)
CHEBI:64077 (3)
CHEBI:64075 (3)
CHEBI:70731 (3)
CHEBI:13388 (3)
CHEBI:35098 (3)
CHEBI:34773 (3)
CHEBI:34606 (3)
CHEBI:74004 (3)
CHEBI:74007 (3)
CHEBI:134176 (3)
CHEBI:74853 (3)
CHEBI:71517 (3)
CHEBI:58838 (3)
CHEBI:58837 (3)
CHEBI:57677 (3)
CHEBI:60464 (3)
CHEBI:65078 (3)
CHEBI:48595 (3)
CHEBI:73682 (3)
CHEBI:27973 (3)
CHEBI:131350 (3)
CHEBI:45506 (3)
CHEBI:58556 (3)

Metabolite Name

Glyceryl glycoside (1)
Dihydroquinazoline (1)
Alpha-tocopherol (1)
Ergostene (1)
D-Trehalose (1)
ALA (1)
Prenol phosphate (1)
Dibenzoxepine (1)
Thiourea (1)
Hydroxybutyric acid (1)
Docosanoic acid (1)
Phytol (1)
Ethanolamine (1)
Acetate (1)
Myo-inositol (1)
GABA (1)
Luteoforol (1)
Trans-resveratrol (1)
Luteolin (1)
Apigenin (1)
Malvidin 3-O-glucoside (1)
Luteolinidin (1)
Apigeninidin (1)
Caffeic acid (1)
P-coumaric acid (1)
Vanillic acid (1)
D-Galactose (1)
D-Fructose (1)
D-Glucose (1)
Oxalic acid (1)

First Public Date

2025 (506)
2013 (57)
2014 (30)
2024 (24)
2026 (21)
2023 (15)
2020 (11)
2022 (10)
2019 (10)
2021 (9)
2018 (9)
2015 (8)
2017 (5)
2016 (1)

Modelling Approach

Constraint-based model (5)
Ordinary differential equation model (1)

Lab affiliation

Staff Scientist Biological Systems & Engineering Division Lawrence Berkeley National Laboratory Berkeley CA 94720 (3)
NREL (2)
Technical University of Munich (TUM); TUM School of Life Sciences, Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS); Gregor-Mendel-Strasse 4 85354 Freising GERMANY (1)
Department of Life Sciences, Chalmers University of Technology, 412 96, Gothenburg, Sweden (1)
Principle Investigator • Institute Fellow • Assistant Professor Department of Chemistry and Biochemistry & Renewable and Sustainable Energy Institute (1)
Otto-von-Guericke University Magdeburg (1)
National Renewable Energy Laboratory, Golden (CO), USA (1)
ISAS Bunsen-Kirchhoff-Str. 11 44139 Dortmund Germany (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technische Universität München (TUM) Gregor-Mendel-Straße 4 85354 Freising (1)
ERA Chair in Gas Fermentation Technologies, Institute of Technology, University of Tartu, Tartu, Estonia (1)
Nowergian Univeristy of Life Sciences (1)
Department of Biochemistry, University of Colorado, Boulder, CO 80309, USA Renewable and Sustainable Energy Institute, University of Colorado, Boulder, CO 80309, USA National Renewable Energy Laboratory, Golden, CO 80401, USA (1)
Full Professor for Analytical Chemistry Institute of Chemical Technologies and Analytics TU Wien Getreidemarkt 9/E164 A-1060 Vienna Austria (1)
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, 1090 Vienna, Austria (1)
Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch Str. 10 35043 Marburg Germany (1)
Proteomics Core Facility and Research Group Proteomics, CEITEC-MU, Masaryk University, Brno, Czech Republic (1)