Reporter gene technology

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Unknown (2702)
Transcriptomics (368)
Genomics (156)
Proteomics (91)
Other (7)
Models (5)
Metabolomics (1)

Organisms

Homo sapiens (148)
Mus musculus (112)
Arabidopsis thaliana (13)
Drosophila melanogaster (12)
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Organisms

Homo sapiens (57)
Mus musculus (30)
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Arabidopsis thaliana (4)
Corynebacterium glutamicum R (3)
Drosophila melanogaster (2)
Caenorhabditis elegans (2)
Escherichia coli (2)
Rattus norvegicus (2)
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Bacteria (1)
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Bos taurus (1)
synthetic construct (1)

Repository

biostudies-arrayexpress (346)
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Tissue

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Monocyte (3)
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Early embryonic cell (2)
Leaf (2)
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T cell (2)
Blood (1)
Blood plasma (1)
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Breast cancer cell line (1)
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Disease

Lung adenocarcinoma (5)
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HPV positive (1)
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ARR1-SRDX (1)
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Normal (1)
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Breast cancer (1)
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Macular holes (1)
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Metabolic dysfunction-associated steatotic liver disease (1)
Niemann-Pick disease type C1 (1)
Niemann-Pick disease type C2 (1)
Parkinson's disease (1)
Parkinson's disease 1 (1)
Proliferative diabetic retinopathy (1)
Retinal degeneration (1)

Technology Type

Mass Spectrometry (80)
Shotgun proteomics (55)
Bottom-up proteomics (22)
Data-dependent acquisition (11)
Affinity purification coupled with mass spectrometry proteomics (6)
Mass spectrometry (1)
All-ion fragmentation (1)
Gel-based experiment (1)
Top-down proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (22)
Illumina HiSeq 2000 (7)
Illumina HiSeq 4000 (5)
NextSeq 500 (5)
Illumina HiSeq 2500 (4)
Q Exactive (3)
Illumina NovaSeq X (2)
Illumina MiSeq (2)
NextSeq 550 (2)
DNBSEQ Devices (1)
TriFast (VWR, 30-2010), RNeasy Mini Kit (Qiagen, 74104), DNAse 1 (NEB, M0303); Agilent 2100 Bioanalyzer (1)
HEK-293T cells, Media, PEI, Illumination device (1)
10X Genomics Chromium Controller (1)
Agilent Microarray Hybridization Chamber Kit and Hybridization oven rotator (1)
Flexercell FX-4000C (1)
BD FACSARIA III (1)
Fluidigm C1 (1)
Helicos (1)
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AB SOLiD System (1)
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ScanArray 5000 [PerkinElmer] (1)
ArrayWoRx Biochip Reader [Applied Precision] (1)
BAS-5000 [FUJIFILM] (1)
Illumina Genome Analyzer II (1)
Scanning hardware (1)
Illumina HiSeq X (1)
NextSeq 2000 (1)
DNBSEQ-G400 (1)
LTQ (1)

Publication Date

2010 (55)
2013 (47)
2015 (39)
2014 (38)
2011 (31)
2012 (30)
2024 (26)
2022 (25)
2008 (23)
2025 (22)
2016 (18)
2021 (18)
2023 (16)
2018 (16)
2009 (16)
2026 (12)
2007 (11)
2020 (10)
2019 (7)
2017 (7)
2004 (7)
2006 (4)
2005 (1)

CHEBI ID

CHEBI:177096 (1)
CHEBI:175529 (1)
CHEBI:80223 (1)
CHEBI:175809 (1)
CHEBI:169420 (1)
CHEBI:192313 (1)
CHEBI:192333 (1)
CHEBI:168743 (1)
CHEBI:30501 (1)
CHEBI:173252 (1)
CHEBI:88502 (1)
CHEBI:192294 (1)
CHEBI:171900 (1)
CHEBI:190159 (1)
CHEBI:192318 (1)
CHEBI:174974 (1)
CHEBI:173683 (1)
CHEBI:193859 (1)
CHEBI:89435 (1)
CHEBI:190175 (1)
CHEBI:191996 (1)
CHEBI:181099 (1)
CHEBI:177988 (1)
CHEBI:175744 (1)
CHEBI:175734 (1)
CHEBI:175289 (1)
CHEBI:168750 (1)
CHEBI:191898 (1)
CHEBI:193616 (1)
CHEBI:176137 (1)

Metabolite Name

Beryllium (1)
3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid (1)
Bitalin A 12-glucoside (1)
6-hydroxy-2-phenyl-4H-chromen-4-one (1)
2-Hydroxy-2-phenylacetonitrile O-[b-D-apiosyl-(1->2)-b-D-glucoside] (1)
7-Hydroxy-6-methoxy-alpha-pyrufuran (1)
5'-Methoxybilobetin (1)
Artomunoxanthentrione epoxide (1)
Erysothiopine (1)
4,5-Dimethyl-2-heptyloxazole (1)
3-Mercapto-3-methyl-1-butanol (1)
Gamma-Glutamyl-S-methylcysteinyl-beta-alanine (1)
2-Aminoquinoline (1)
Jangomolide (1)
(7R*,8R*)-3-Methoxy-3',4,7,9,9'-pentahydroxy-8,4'-oxyneolignan 4-xyloside (1)
Irilone (1)
[8]-Gingerol (1)
2-Methoxy-3-(1-methylpropyl)pyrazine (1)
Annocherine B (1)
Rutacridone (1)
Acetylhydrazine (1)
7-Aminoflunitrazepam (1)
Glycyl-Gamma-glutamate (1)
Histidinyl-Arginine (1)
Aquifoliunine EII (1)
PE(18:4(6Z,9Z,12Z,15Z)/14:0) (1)
DG(22:5(4Z,7Z,10Z,13Z,16Z)/14:0/0:0) (1)
DG(16:1(9Z)/18:3(6Z,9Z,12Z)/0:0) (1)
Nomilinic acid (1)
17-Epiestriol (1)

IsPrivate

False (5)

First Public Date

2014 (27)
2024 (19)
2026 (17)
2023 (17)
2022 (11)
2020 (11)
2019 (11)
2025 (9)
2021 (8)
2018 (5)
2017 (4)
2013 (4)
2016 (3)
2015 (2)

Classification

bacteria (6)
protozoa (1)

Modelling Approach

Ordinary differential equation model (5)

Modification

N6 (1)

Study type

Transcription profiling by array (199)
RNA-seq of coding RNA (36)
RNA-seq of coding RNA from single cells (28)
Other (15)
ChIP-chip by tiling array (14)
Unknown experiment type (13)
RNA-seq of non coding RNA (11)
Methylation profiling by array (6)
Comparative genomic hybridization by array (5)
ChIP-chip by array (3)
Cell line - Single-cell sequencing (2)
Transcription profiling by tiling array (2)
Proteomic profiling by array (2)
Methylation profiling by high throughput sequencing (2)
Baseline (1)
Animal - High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
RNAi profiling by array (1)
RIP-seq (1)
ChIP-seq (1)
MicroRNA profiling by array (1)
DNA-seq (1)

Release Date

2022 (315)
2021 (295)
2025 (261)
2020 (254)
2023 (253)
2024 (232)
2019 (209)
2018 (187)
2015 (141)
2017 (125)
2016 (124)
2014 (101)
2013 (88)
2010 (88)
2012 (86)
2011 (75)
2009 (49)
2008 (43)
2026 (32)
2007 (21)
2004 (17)
2006 (15)
2005 (9)
2003 (9)
2001 (7)
2002 (4)
2000 (3)
1998 (3)
1999 (2)

Lab affiliation

Thoracic Oncology Molecular Medicine Program Moffitt Cancer Center Tampa, FL, USA (4)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (2)
Chronic Disease Programme (UFIEC), Instituto de Salud Carlos III, 28220 Majadahonda, Madrid, Spain (2)
Proteome Exploration Laboratory, California Institute of Technology, Pasadena, CA 91125, USA (2)
1Dipartimento di Chimica, Sapienza Università di Roma, Piazzale Aldo Moro 5, 00185 Rome, Italy (1)
Aging $ Metabolism, Gene Translation Laboratory, Institute for Research in Biomedicine, The Barcelona Institute of Science and Technology, Barcelona, Catalonia, Spain. (1)
Associate Professor, Department of Biology, Massachusetts Institute of Technology Whitehead Institute of Biomedical Research (1)
Associate Professor, Department of Biology, Massachusetts Institute of Technology and Whitehead Institute of Biomedical Research (lab head) (1)
Biomedical Research Institute, Foundation for Research and Technology-Hellas, Ioannina, Greece. (1)
Buchmann Institute for Molecular Life Sciences, Goethe University Frankfurt am Main, Germany (1)
Buchmann Institute for Molecular Life Sciences, Pharmaceutical Chemistry, Goethe-University Frankfurt am Main,Max-von-Laue-Strasse 15. R. 3.652, D-60438 Frankfurt amMain, Germany (1)
Cardiovascular Proteomics Laboratory & Proteomics Unit Centro Nacional de Investigaciones Cardiovasculares Madrid, Spain (1)
Center for Theragnosis, KIST, Seongbuk-gu, SEOUL, REP of KOREA (1)
Centre for Cancer Drug Discovery Institute of Cancer Research London (1)
Chemical Proteomics, Division of Physiological Chemistry I, MBB Department, Biomedicum, Karolinska Institute, 17177 Stockholm (1)
China Agricultural University, 100193, China (1)
Department of Bioactive and Functional Food Chemistry, Institute of Applied Biosciences, Karlsruhe Institute of Technology (KIT), Karlsruhe, Germany (1)
Department of Biology, University of North Dakota, Grand Forks, ND 58202, USA. (1)
Department of Cell Biology, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA. (1)
Department of Cell and Molecular Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA-92037 (1)
Department of Cellular and Molecular Medicine, University of Copenhagen (1)
Department of Integration of Chinese and Western Medicine, School of Basic Medical Sciences, Peking University, 38 Xueyuan Road, Beijing 100191, People’s Republic of China (1)
Department of Integration of Chinese and Western Medicine, School of Basic Medicine Science, Peking University, China (1)
Department of Medical Biology, Faculty of Health Sciences, UiT The Arctic University of Norway, Tromsø, Norway (1)
Department of Molecular Biology, Faculty of Science, Radboud Institute for Molecular Life Sciences, Oncode Institute, Radboud University Nijmegen, 6525 GA Nijmegen, The Netherlands (1)
Department of Molecular Systems Biology, Cell Science Research Center, Royan Institute for Stem Cell Biology and Technology, ACECR, Tehran, Iran (1)
Department of Neurology School of Medicine Oregon Health & Science University Portland, OR, USA (1)
Department of Oncology and Pathology, Karolinska Institute and Science for Life Laboratory (1)
Department of Oncology-Pathology, Karolinska Institutet and Science for Life Laboratory (1)
Department of Oncology-Pathology, Karolinska Institutet and Science for Life Laboratory (lab head) (1)

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Terminator Operon Reporter: combining a transcription termination switch with reporter technology for improved gene synthesis and synthetic biology applications.

Not available

S-EPMC4879669 | biostudies-literature

Tagging of genomic STAT3 and STAT1 with fluorescent proteins and insertion of a luciferase reporter in the cyclin D1 gene provides a modified A549 cell line to screen for selective STAT3 inhibitors.

Not available

S-EPMC3732202 | biostudies-literature

A Novel Luciferase-Based Reporter Gene Technology for Simultaneous Optical and Radionuclide Imaging of Cells.

Not available

S-EPMC11312113 | biostudies-literature

Comparative proteomic analysis and bioluminescent reporter gene assays to investigate effects of simulated microgravity on Caco-2 cells

Microgravity is one of the most important features in spaceflight. Previous evidence has shown that significant changes to the musculoskeletal and immune systems occurred under microgravity. The present study was undertaken to explore the change in protein abundance in human colon colorectal cells ...

ORGANISM(S): Homo sapiens (Human)

2017-07-26 | PXD005823 | Pride

Transcriptome analysis of mouse cerebral cortical neural progenitor cells

Transcriptome analysis of neural progenitor/stem cells is limited by the lack of a reliable method for cell isolation. We have designed a genetic dual reporter strategy that can allow prospective isolation of cortical neural progenitor cells and their neuronal progeny form the same animals. These ce...

ORGANISM(S): Mus musculus

2011-09-19 | E-GEOD-22946 | biostudies-arrayexpress

Sensing chemical-induced DNA damage using CRISPR/Cas9-mediated gene-deletion yeast-reporter strains.

Not available

S-EPMC10834598 | biostudies-literature

A cell-based ribozyme reporter system employing a chromosomally-integrated 5' exonuclease gene.

Not available

S-EPMC7967978 | biostudies-literature

Real-time monitoring of chloroplast gene expression by a luciferase reporter: evidence for nuclear regulation of chloroplast circadian period.

Not available

S-EPMC1347041 | biostudies-literature

A genomic approach to gene fusion technology.