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MetabolomicsMetabolome and proteome changes in skeletal muscle and blood of pre-weaning calves fed leucine and threonine supplemented diets

In pre-weaning calves, both leucine and threonine play important roles in growth and muscle metabolism. In this study, metabolomics, proteomics and clinical chemistry were used to assess the effects of leucine and threonine supplementation added to milk replacer on 14 newborn Holstein male calves...

2020-02-20 | MTBLS1045 | MetaboLights
TranscriptomicsGenome-wide search for novel human uORFs and N-terminal protein extensions using ribosomal footprinting
So far, the annotation of translation initiation sites (TISs) has been based mostly upon bioinformatics rather than experimental evidence. We adapted ribosomal footprinting to puromycin-treated cells to generate a transcriptome-wide map of TISs in a human monocytic cell line. A neural network was tr...
ORGANISM(S): Homo sapiens 
2012-08-08 | E-GEOD-39561 | biostudies-arrayexpress
ProteomicsVibrio vulnificus CMCP6 Proteome Analysis
Ribosomal proteins and global proteome were quantified by iTRAQ Labeling. Ribosomal proteins in 70S ribosomes purified from ΔrrnI-comp cells compared to those from ΔrrnI cells. Also, WT cells was measured.
ORGANISM(S): Vibrio vulnificus CMCP6 
2018-11-23 | PXD009215 | Pride
Ribosomal proteins Ribosome Global proteome Vibrio vulnificus Itraq 
UnknownReconstructing the evolution of the mitochondrial ribosomal proteome.
Not available
S-EPMC1950548 | biostudies-literature
ProteomicsBarley newly synthesized ribosomal proteome: E.coli control samples
Ribosomal proteome profiling control for project: Plants synthesize new ribosomal proteins and recycle others in cold-acclimated ribosomes and these in turn synthesize a differential proteome in barley root meristems.
ORGANISM(S): Escherichia coli 
2024-05-23 | PXD032938 | Pride
E.coli 70s ribosomes rproteome 
UnknownSARS-CoV-2-Encoded Proteome and Human Genetics: From Interaction-Based to Ribosomal Biology Impact on Disease and Risk Processes.
Not available
S-EPMC7418564 | biostudies-literature
ProteomicsBottom-up and top-down LC-MS/MS of ribosomal purifications
Ribosomal purifications of spinach 70S ribosome and human 40S and 60S ribosomal subunits were analyzed with bottom-up LC-MS/MS to identify proteins comprising purified complexes as well as co-purified proteins. In order to assess and quantify proteoforms of ribosomal proteins in ribosomal purificati...
ORGANISM(S): Spinacia oleracea Homo sapiens (Human) Escherichia coli 
2018-06-26 | PXD008881 | Pride
Ribosome Top-down Bottom-up 
ProteomicsRibosomal proteome of SW1353 cells cultured in the presence of the 10 ng/ml TGF-β3
Ribosomal proteome of SW1353 cells cultured in the presence of the 10 ng/ml TGF-β3 and control condition was assessed.
ORGANISM(S): Homo sapiens (Human) 
2024-05-22 | PXD046114 | Pride
Ribosomal proteome Tgfb Sw1353 
UnknownAdaptive Remodeling of the Bacterial Proteome by Specific Ribosomal Modification Regulates Pseudomonas Infection and Niche Colonisation.
Not available
S-EPMC4741518 | biostudies-literature
UnknownProteome-wide identification of metamorphic protein candidates using mass spectrometry.
Not available
S-EPMC12642558 | biostudies-literature
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