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MetabolomicsOsTTG1-dependent gene activation confer chilling tolerance in colored rice
Metabolomic analysis of anthocyanin accumulation in colored rice under cold stress
2024-07-31 | MTBLS9234 | MetaboLights
TranscriptomicsComparative transcriptome profiling of chilling stress responsiveness in two contrasting rice genotypes
Rice is sensitive to chilling stress, especially at the seedling stage. To elucidate the molecular genetic mechanisms of chilling tolerance in rice, comprehensive gene expressions of two rice genotypes (chilling-tolerant LTH and chilling-sensitive IR29) with contrasting responses to chilling stress ...
ORGANISM(S): Oryza sativa 
2012-12-21 | E-GEOD-38023 | biostudies-arrayexpress
ProteomicsThe COG1-OsSERL2 complex senses cold to trigger signaling network for chilling tolerance in japonica rice
Improvement of chilling tolerance is a key strategy to face potential menace from abnormal temperature in rice production, which depends on the signaling network triggered by receptors. However, little is known about the QTL genes encoding membrane complexes for sensing cold. Here, Chilling-toleranc...
ORGANISM(S): Oryza sativa (Rice) 
2023-06-18 | PXD042294 | Pride
Rice chilling 
TranscriptomicsGlobal expression profiling of low temperature induced genes in chilling tolerant japonica rice
Three week old seedlings of rice cultivar Jumli Marshi (spp. Japonica) was exposed to cold (+4C) temperatures for varying time periods. Tissue samples were collected in replicates. Microarray data analysis was then performed on the extracted totalRNA from the samples.
ORGANISM(S): Oryza sativa japonica 
2013-05-01 | E-MEXP-3718 | biostudies-arrayexpress
TranscriptomicsEffect of low-Tw treatment before panicle initiation on the chilling response of spikelets at the booting stage in rice.
In rice (Oryza sativa L.), chilling-induced male sterility increased when plants experienced low water temperature (Tw, 18 M-BM-0C for 14 days) before panicle initiation. The number of mature pollen grains after chilling at the booting stage (12 M-BM-0C for 5 days) was only approximately 45% of tota...
ORGANISM(S): Oryza sativa 
2014-12-22 | E-GEOD-59221 | biostudies-arrayexpress
TranscriptomicsA global profiling of gene expression in chilling stress in rice
RNA-Seq was performed to study the change of gene expression before and after chilling treatment in rice. Different change patterns were identified. We have provided a complete view of transcriptome under cold stress condition, which will deepen our understanding of gene expression regulation in c...
ORGANISM(S): Oryza sativa 
2016-04-13 | E-GEOD-67373 | biostudies-arrayexpress
TranscriptomicsChilling stress transcriptional regulatory networks of japonica rice
The central role of transcriptional regulation in integrating various low temperature response mechanisms has been established in Arabidopsis, where the CBF/DREB regulon plays a prominent role during acclimation. Rice is sensitive to chilling but many japonica cultivars can survive continuous exposu...
ORGANISM(S): Oryza sativa 
2009-12-30 | E-GEOD-8767 | biostudies-arrayexpress
ProteomicsCOLD6-OSM1 module senses chilling for the tolerance via 2',3'-cAMP signal in rice
To further elucidate how COLD6 regulates rice chilling tolerance, we investigated COLD6 interacting proteins using COLD6ind-GFP transgenic line by immunoprecipitation in combination with mass spectrometry (IP-MS). COLD6ind-GFP was applied to bind proteins in chilling-treated rice seedling samples, a...
ORGANISM(S): Oryza sativa (Rice) 
2024-11-02 | PXD049238 | Pride
Cold6 Chilling resilience Rice Osm1 Cold perception Temperature adaption 
ProteomicsCOLD6-OSM1 module senses chilling for the tolerance via 2',3'-cAMP signal in rice
To further elucidate how COLD6 regulates rice chilling tolerance, we investigated COLD6 interacting proteins using COLD6ind-GFP transgenic line by immunoprecipitation in combination with mass spectrometry (IP-MS). COLD6ind-GFP was applied to bind proteins in chilling-treated rice seedling samples, a...
ORGANISM(S): Oryza sativa (Rice) 
2024-11-02 | PXD049115 | Pride
Osm1 Cold6 Chilling resilience Rice Cold perception Temperature adaption 
TranscriptomicsTranscriptomic profiling of rice (Oryza sativa) cv. Sijung and Jumli Marshi during early chilling stress
The aim of this study was to conduct global gene expression profiling and comparative analysis of two chilling tolerant rice varieties, Jumli Marshi and Sijung (spp. Japonica), during early chilling stress (24h, 10C). Leaf tissue from cv. Jumli Marshi and cv. Sijung plants grown under chilling stres...
ORGANISM(S): Oryza sativa 
2014-11-30 | E-MTAB-3121 | biostudies-arrayexpress
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