Richardson S S - OmicsDI

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CHEBI ID

CHEBI:137451 (1)
CHEBI:137450 (1)
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CHEBI:50593 (1)
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CHEBI:137452 (1)
CHEBI:137453 (1)
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CHEBI:28716 (1)

Metabolite Name

PE(12:0/16:0) (1)
Ergosta-5,7,24(28)-trien-3beta-ol (1)
(2S,3S,4R)-2-aminohexadecane-1,3,4-triol (1)
3-dehydro-4-methylzymosterol (1)
Palmitoleic acid (1)
Ergosterol (1)
PI(18:0/0:0) (1)
Sphingosine (1)
3-Dehydrosphinganine (1)
Uracil (1)
PA(14:0/16:1(9Z)) (1)
4beta-methylzymosterol-4alpha-carboxylic acid (1)
PA(14:1(9Z)/16:0) (1)

IsPrivate

False (1)

First Public Date

2014 (3)
2020 (2)
2024 (1)
2022 (1)
2019 (1)

Classification

bacteria (1)

Modelling Approach

Mathematical model (1)

Modification

15.994915 (1)
2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)
57.021464 (1)

Study type

Transcription profiling by array (67)
RNA-seq of coding RNA (10)
Comparative genomic hybridization by array (9)
Proteomic profiling by array (4)
RNA-seq of coding RNA from single cells (4)
Methylation profiling by array (3)
Unknown experiment type (2)
ATAC-seq (2)
ChIP-seq (2)
Human - High-throughput sequencing (1)
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Release Date

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2000 (4)
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1998 (2)
1997 (1)

Lab affiliation

European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK (3)
The University of Manchester (3)
Waters Corporation (2)
Division of Cell Matrix Biology and Regenerative Medicine, School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester, United Kingdom, M13 9PT (2)
Nantes Université, CNRS, INSERM, l’institut du thorax, 44000 Nantes, France (1)
Agrochemistry and Biochemistry Department. University of Alicante (1)
Cancer Research Unit, Children’s Medical Research Institute, Faculty of Medicine and Health, The University of Sydney, Westmead NSW Australia (1)
Department of Cell and Regenerative Biology Department of Chemistry Director of Mass Spectrometry Human Proteomics Program University of Wisconsin-Madison (1)
Cell Signalling & Immunology, School of life Sciences, University of Dundee (1)
Mechanisms of Diseases & Translational Research, School ofMedical Sciences, Department of Pathology, UNSW, Sydney, Australia (1)
Structural Genomics Consortium (SGC), Chemical biology Group, University of Oxford, United Kingdom. also affiliated with: Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, United Kingdom. (1)
Donnelly Centre, University of Toronto Lunenfeld-Tanenbaum Research Institute, Sinai Health System (1)
Chair of Proteomics and Bioanalytics Technische Universitaet Muenchen (1)
Department of Molecular, Cellular, and Developmental Biology (MCDB) at University of California Santa Barbara (UCSB) (1)
Professor, Department of Cellular and Molecular Pharmacology (1)
Head, Cancer Data Science (ProCan), Children's Medical Research Institute, The University of Sydney, Westmead, NSW, Australia (1)
Murdoch Children's Research Institute, Melbourne, VIC, Australia (1)
BGI-Shenzhen (1)
MRC Cancer Unit, University of Cambridge; Hutchison/MRCResearch Centre, Box 197, Cambridge Biomedical Campus, Cambridge, CB2 0XZ, UK (1)
The Uinversity of Manchester (1)
Université Paris Cité, Institut Cochin, CNRS, INSERM, Paris, France (1)
Biology Department University of Massachusetts Boston Boston, USA (1)
Dept of Pathology, Dalhousie University (1)
Cell Signalling & Immunology, School of Life Sciences, University of Dundee (1)
Plants, Photosynthesis and Soil, School of Biosciences, University of Sheffield, UK (1)
Division of Cell Matrix Biology & Regenerative Medicine (L5) / Division of Cell Matrix Biology & Regenerative Medicine, University of Manchester (1)
Biology Department, University of Massachusetts Boston, USA (1)
Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, 90187 Umeå, Sweden (1)
Umea Plant Science Centre, Department of Forest Genetics & Plant Physiology, Swedish University of Agricultural Sciences, SE-901 83 Umea, Sweden (1)
National Center for Advancing Translational Sciences, National Institutes of Health (1)

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pathogen (1)
pathogen:bacterium (1)

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Streptococcus pneumoniae, S. mitis, and S. oralis Produce a Phosphatidylglycerol-Dependent, ltaS-Independent Glycerophosphate-Linked Glycolipid.

Not available

S-EPMC8544892 | biostudies-literature

Local modulation of DNA replication controls

Background: Eukaryotic cells must inhibit re-initiation of DNA replication at each of the thousands of origins in their genome because re-initiation events can generate genomic alterations with extraordinary frequency. To minimize the probability of re-initiation from so many origins, cells use a b...

ORGANISM(S): Saccharomyces cerevisiae

2014-03-15 | E-GEOD-55420 | biostudies-arrayexpress

Streptococcus pneumoniae, S. pyogenes and S. agalactiae membrane phospholipid remodelling in response to human serum.

Not available

S-EPMC8290102 | biostudies-literature

Expression profiling by array of Salmonella enterica serovar Typhimurium (SL1344) qseC mutant x wild type

“Stress, survival and virulence: the multi-faceted host/microbial interactions.” Bacteria employ epinephrine and norepinephrine, which converge to distinct bacterial crucial processes, like survival and pathogenicity. A novel stress periplasmic membrane protein belonging to previously described BOF...

ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

2012-05-31 | E-GEOD-38353 | biostudies-arrayexpress

RASS-Enabled S/P-C and S-N Bond Formation for DEL Synthesis.

Not available

S-EPMC7486030 | biostudies-literature

Nitric oxide storage and transport in cells are mediated by glutathione S-transferase P1-1 and multidrug resistance protein 1 via dinitrosyl iron complexes.

Not available

S-EPMC3249115 | biostudies-literature

Noise amplification and ill-convergence of Richardson-Lucy deconvolution.

Not available

S-EPMC11751374 | biostudies-literature

Model structures for C-(A)-S-H(I).