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MetabolomicsA metabolomics-based approach for the evaluation of off-tree ripening conditions and different postharvest treatments in mangosteen (Garcinia mangostana) (Peel parts assay)

INTRODUCTION: Metabolomics is an important tool to support postharvest fruit development and ripening studies. Mangosteen (Garcinia mangostana L.) is a tropical fruit with high market value but has short shelf-life during postharvest handling. Several postharvest technol...

2021-02-10 | MTBLS871 | MetaboLights
MetabolomicsA metabolomics-based approach for the evaluation of off-tree ripening conditions and different postharvest treatments in mangosteen (Garcinia mangostana) (Flesh parts assay)

INTRODUCTION: Metabolomics is an important tool to support postharvest fruit development and ripening studies. Mangosteen (Garcinia mangostana L.) is a tropical fruit with high market value but has short shelf-life during postharvest handling. Several postharvest techno...

2021-02-10 | MTBLS872 | MetaboLights
MetabolomicsMetabolic differences in ripening of Solanum lycopersicum 'Ailsa Craig' and three monogenic mutants
Application of mass spectrometry enables the detection of metabolic differences between groups of related organisms. Differences in the metabolic fingerprints of wild-type Solanum lycopersicum and three monogenic mutants, ripening inhibitor (rin), non-ripening (nor) and Colourless non-ripening (Cnr)...
2014-02-07 | MTBLS36 | MetaboLights
MetabolomicsMetabolic differences in ripening of Solanum lycopersicum 'Ailsa Craig' and three monogenic mutants (alternative assay to MTBLS36)
The purpose of this study was to highlight metabolic differences between different cultivars of tomato through development and ripening. Application of mass spectrometry enables the detection of metabolic differences between groups of related organisms. Differences in the metabolic fingerprints of w...
2017-10-18 | MTBLS73 | MetaboLights
MetabolomicsMulti-Omics analyses reveal dynamic interactions between DNA methylation and transcriptional regulation during black raspberry ripening
We show developmental-series transcriptome, methylome, and metabolome to reveal extensive epigenetic reprogramming during black raspberry (Rubus occidentalis) fruit ripening. Multi-omics integration reveals coordinated anthocyanin accumulation parallels expression of biosynthetic and regulatory gene...
2026-09-28 | MTBLS15819 | MetaboLights
ProteomicsProteomics to identify putative genes underlying fruit ripening and related to long shelf life
Our aim was to gather additional evidence of tomato fruit ripening by assessing two long shelf life near isogenic lines (NILs). These two NILs, named NIL115 and NIL080, carried wild introgression provided by S. pimpinellifolium accession LA0722 in the genetic background of Caimanta (CAI) from S. lyc...
ORGANISM(S): Solanum lycopersicum Solanum pimpinellifolium 
2023-08-02 | PXD036132 | Pride
Fruit ripening Ripening stage  red ripe Solanum spp. Fruit softening Mature green 
TranscriptomicsIdentification of direct target genes of the tomato FRUITFULL homologs during ripening by promoter ChIP-chip
Tomato (Solanum lycopersicum) has two MADS-box FRUITFULL homologs, FUL1 and FUL2, both of which are able to interact with the master ripening regulator RIN. Here, we performed chromatin immunoprecipitation coupled with a DNA microarray (ChIP-chip) for the 2-kb upstream putative promoters of whole t...
ORGANISM(S): Solanum lycopersicum 
2014-06-23 | E-GEOD-49125 | biostudies-arrayexpress
TranscriptomicsIdentification of direct target genes of the tomato fruit-ripening regulator RIN by promoter ChIP-chip
The tomato (Solanum lycopersicum) MADS-box transcription factor RIN, one of the earliest-acting fruit-ripening regulators, is required for both ethylene-dependent and -independent regulatory pathways for fruit ripeing. Here, we performed chromatin immunoprecipitation coupled with a DNA microarray (...
ORGANISM(S): Solanum lycopersicum 
2013-03-28 | E-GEOD-40257 | biostudies-arrayexpress
ProteomicsTomato nuclear proteome reveals the involvement of specific E2 ubiquitin-conjugating enzymes in fruit ripening
Fruits are unique to flowering plants and play a central role in seed maturation and dispersal. Molecular dissection of fruit ripening has received considerable interest because of the biological and dietary significance of fruit. To better understand the regulatory mechanisms underlying fruit ripen...
ORGANISM(S): Solanum lycopersicum 
2014-11-18 | PXD001414 | Pride
Nucleus Fruit ripening Proteomics Tomato Mads-rin Ubiquitination 
TranscriptomicsGlobal gene expression analysis of normal and ripening inhibitor (rin) mutant tomatoes during ripening
Ripening is an important stage of fruit development to determine its quality as a diet. A tomato (Solanum lycopersicum) MADS-box transcription factor, RIPENING INHIBITOR (RIN), has been believed to serve as a regulator of ripening lying upstream of ethylene-dependent and ethylene-independent pathway...
ORGANISM(S): Solanum lycopersicum 
2012-04-01 | E-GEOD-28564 | biostudies-arrayexpress
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