Rodriguez F F - OmicsDI

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Unknown (9404)
Proteomics (253)
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Models (86)
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Organisms

Homo sapiens (283)
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cellular organisms (1)
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Mus musculus (1)

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Tissue

Digestive System (95)
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DOID:14563 (1)
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Technology Type

Mass Spectrometry (129)
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Instrument Platform

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Publication Date

2014 (116)
2015 (57)
2024 (40)
2005 (31)
2019 (23)
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2013 (22)
2012 (22)
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2020 (15)
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2016 (8)
2007 (8)
2018 (6)
2017 (6)
2011 (6)
2009 (4)
2008 (4)

UNIPROT ID/AC

P24869 (2)
P26309 (2)
P27636 (2)
P29992 (2)
P32562 (2)
P38987 (2)
P40316 (2)
P47035 (2)
P49677 (2)
P53197 (2)
Q00684 (2)
Q03018 (2)
Q94JM3 (2)
Q96247 (2)
O14467 (1)
O14543 (1)
O14974 (1)
O35599 (1)
O43526 (1)
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O54910 (1)
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O88351 (1)
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O88944 (1)
O94810 (1)
O95257 (1)
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P00734 (1)

ENSEMBL ID

ENSG00000170477 (96)
ENSG00000229353 (49)
ENSG00000147251 (20)
ENSG00000247315 (3)
ENSG00000176092 (2)
ENSG00000204131 (2)

CHEBI ID

CHEBI:15422 (36)
CHEBI:15996 (36)
CHEBI:17552 (36)
CHEBI:17754 (36)
CHEBI:15846 (35)
CHEBI:16027 (35)
CHEBI:16595 (35)
CHEBI:16761 (35)
CHEBI:16908 (35)
CHEBI:15379 (34)
CHEBI:15978 (34)
CHEBI:16001 (34)
CHEBI:16108 (34)
CHEBI:16240 (34)
CHEBI:16356 (34)
CHEBI:16749 (34)
CHEBI:17268 (34)
CHEBI:17489 (34)
CHEBI:17526 (34)
CHEBI:17794 (34)
CHEBI:17835 (34)
CHEBI:18021 (34)
CHEBI:18421 (34)
CHEBI:29052 (34)
CHEBI:29101 (34)
CHEBI:30763 (34)
CHEBI:32816 (34)
CHEBI:4167 (34)
CHEBI:4170 (34)
CHEBI:10723 (33)

Metabolite Name

L-leucine (3)
Alpha-tocopherol (2)
Aspartic acid (2)
Beta-sitosterol (2)
Catechol (2)
Citric acid (2)
Glyceric acid (2)
Glycerol (2)
Glycine (2)
L-alanine (2)
L-glutamic acid (2)
L-isoleucine (2)
L-threonine (2)
L-valine (2)
Linoleic acid (2)
Maleic acid (2)
Palmitic acid (2)
Quinic acid (2)
Shikimic acid (2)
Succinic acid (2)
Sucrose (2)
(Nω-L-arginino)succinic acid (1)
(R)-pantothenate (1)
(S)-lactate (1)
1,2,4-benzenetriol (1)
1,6-anhydroglucose (1)
1-hydroxy-2-piperidinone (1)
1-monolinolein (1)
10.91 450 dehydro-CHO (1)
11-trans-octadecenoic acid (1)

First Public Date

2022 (1)
2014 (1)

Modelling Approach

Ordinary differential equation model (50)
Logical model (1)

Lab affiliation

University Hospital Cologne (4)
Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany (3)
Centro de Investigaciones Biológicas Margarita Salas, CSIC, Madrid, Spain (2)
Head of the Curie Institute Mass Spectrometry Platform (2)
Head, Chair Plant Biotechnology Faculty of Biology University of Freiburg Schaenzlestrasse 1 D-79104 Freiburg Germany (2)
Institut Pasteur, Université Paris Cité, CNRS UAR 2024, Mass Spectrometry for Biology Unit, Paris, France (2)
Molecular Parasitology and Entomology Unit,Laboratory of Malaria and Vector Research, National Institutes of Health. USA. (2)
Pacific Northwest National Laboratory (2)
Systems Biology Ireland, University College Dublin (2)
(1) Laboratory of Angiogenesis and Vascular Metabolism, Vesalius Research Center, Department of Oncology, University of Leuven, Leuven, B-3000, Belgium; (2) Laboratory of Angiogenesis and Vascular Metabolism, Vesalius Research Center, VIB, Leuven, B-3000, Belgium (1)
1) CNRS - ITAV USR3505, 31106 Toulouse, France 2) Nova Medical School, CEDOC- Chronic Diseases, 1150-082, Lisboa, Portugal (1)
1) Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, Switzerland 2) Faculty of Science, University of Zurich, Zurich, Switzerland (1)
1, Department of Biology, Institute of Molecular Systems Biology, ETH, Zurich, Switzerland 2, Faculty of Science, University of Zurich, Zurich, Switzerland (1)
1Department of Neuroscience & Center for Translational Research in Neurodegenerative Disease, University of Florida, Gainesville, FL, USA (1)
1Institute of Lung Health and Immunity, Comprehensive Pneumology Center Munich with the CPC-M bioArchive, Helmholtz Center Munich, Research Center for Environmental Health, Member of the German Center of Lung Research (DZL), Germany (1)
3Division of Chemistry I, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden (1)
Analytical Biochemistry and Proteomics Unit, Institut Pasteur de Montevideo & Instituto de Investigaciones Biológicas Clemente Estable. (1)
Analytical Biochemistry and Proteomics Unit. IIBCE, Institut Pasteur de Montevideo (1)
Associate Professor Departamento de Bioquímica y Biología Molecular, Universidad de Córdoba, Campus de Excelencia Internacional CeiA3, Córdoba, Spain. (1)
Baylor College of Medicine, Houston, Texas (1)
Bernhard Nocht Institute for Tropical Medicine, Hamburg, Germany (1)
Bioinformatics (1)
CIC bioGUNE Proteomics Platform Bizkaia Tech. Park Build 800 Derio 48160 Spain (1)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (1)
CRUK Beatson Institute (1)
Cell Signalling (1)
Centro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid. (1)
Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC) (1)
Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC), Madrid, Spain (1)
Chair of Proteomics and Bioanalytics, Technical University of Munich, Bavaria, Germany (1)

IsPrivate

False (86)

Model Flag

Non Kinetic (38)

Modification

2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)
Not available (1)

Study type

Transcription profiling by array (82)
RNA-seq of coding RNA (20)
Unknown experiment type (9)
Methylation profiling by array (4)
Other (3)
RNA-seq of non coding RNA (3)
ChIP-chip by array (2)
Comparative genomic hybridization by array (2)
ChIP-seq (2)
RNA-seq of coding RNA from single cells (2)
RNA-seq of total RNA (2)
ChIP-chip by tiling array (1)
Genotyping by array (1)
Genotyping by high throughput sequencing (1)

Release Date

2022 (1231)
2025 (1141)
2021 (1121)
2023 (1101)
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2020 (722)
2019 (569)
2018 (420)
2017 (395)
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2014 (243)
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2011 (129)
2010 (103)
2009 (78)
2008 (40)
2007 (29)
2006 (23)
2005 (14)
2004 (13)
2003 (8)
2002 (4)
2000 (4)
1999 (4)
1998 (3)
2001 (2)

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Expression data of pmr1M-bM-^HM-^F mutants

The yeast PMR1 (ATP2C1) gene codes for the eukaryotic prototype of a high affinity P-type ATPase required for Ca2+/Mn2+ transport into the Golgi. Cells lacking PMR1 exhibit multiple genetic interactions with genes involved in DNA recombination and replication, a fact that is not yet understood. We f...

ORGANISM(S): Saccharomyces cerevisiae

2012-06-17 | E-GEOD-29420 | biostudies-arrayexpress

A three monoclonal antibody combination potently neutralizes multiple botulinum neurotoxin serotype F subtypes.

Not available

S-EPMC5360321 | biostudies-literature

New Dioxaborolane Chemistry Enables [(18)F]-Positron-Emitting, Fluorescent [(18)F]-Multimodality Biomolecule Generation from the Solid Phase.

Not available

S-EPMC4916912 | biostudies-literature

Altered mRNA Splicing, Chondrocyte Gene Expression and Abnormal Skeletal Development due to SF3B4 Mutations in Rodriguez Acrofacial Dysostosis.

Not available

S-EPMC5021280 | biostudies-literature

Protein Dynamics in F-like Bacterial Conjugation.