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TranscriptomicsComparison of PRPF4 knockdown in HEK293T cells compared to scrambled shRNA control
HEK293T cells transduced with two shRNAs from MISSION library (TRCN0000364755 and TRCN0000074769) using lentiviral delivery system. HEK293T cells transduced with scrambled shRNA, gifted from Dr. Mauricio Reginato. Sequence is 5′-CCTAAGGTTAAGTCGCCCTCGCTCTAGCGAGGGCGACTTAACCTT-3′. Primary contributions...
ORGANISM(S): Homo sapiens 
2018-10-01 | GSE117384 | GEO
UnknownIntegrated metabolomic and genomic insights into amino acid incorporation within the hybrid polyketide-alkaloid antibiotic TLN-05220.
Not available
S-EPMC12636320 | biostudies-literature
GenomicsEGAS00001000262-sc-20140722 - samples
To characterize the subclonal genomic architecture of androgen-deprived metastatic prostate cancer, we performed whole-genome sequencing (WGS) of 51 tumours from 10 patients to an average sequencing depth of 55x, including multiple metastases from different anatomic sites in each patient and, in fiv...
EGAD00001000891 | EGA
TranscriptomicsTime training
Bees were trained to visit food sources at different times of day. By collecting bees just before the training times, we were able to analyze the genes that are associated with the time of day, the time of training, the activity state, or genes associated with unique spatiotemporal memories
ORGANISM(S): Apis mellifera 
2011-07-01 | E-MTAB-489 | biostudies-arrayexpress
UnknownExcitation/inhibition imbalance and conversion to psychosis in the clinical high risk syndrome: Biophysical modeling finds reduced pyramidal cell excitability across EEG paradigms.
Not available
S-EPMC12458603 | biostudies-literature
GenomicsComparison of PRPF4 knockdown in HEK293T cells compared to scrambled shRNA control
Comparison of PRPF4 knockdown in HEK293T cells compared to scrambled shRNA control
PRJNA481964 | ENA
ProteomicsGeotraces EPZT
Surface seawater ENV solid phase extraction samples collected on the US GEOTRACES EPZT cruise (October-December 2013).
ORGANISM(S): Environmental Samples <bacillariophyta> (ncbitaxon:33858) 
MSV000080173 | MassIVE
GenomicsGenome Wide Association for Asthma and Lung Function

The SNP Typing for Association with Multiple Phenotypes from Existing Epidemiologic (STAMPEED) asthma project includes subjects with asthma and controls from the Chicago Asthma Genetics Study (CAG), NHLBI multicenter Severe Asthma Research Program (SARP) and NHLBI Collaborative Studies ...

phs000355.v1.p1 | EGA
TranscriptomicsA regression-based analysis of ribosome-profiling data reveals a conserved complexity to mammalian translation
A fundamental goal of genomics is to identify the complete set of expressed proteins. Automated annotation strategies rely on assumptions about protein-coding sequences (CDSs), e.g., they are conserved, do not overlap, and exceed a minimum length. However, an increasing number of newly discovered pr...
ORGANISM(S): Mus musculus 
2015-12-03 | E-GEOD-74139 | biostudies-arrayexpress
UnknownMeta- and Orthogonal Integration of Influenza "OMICs" Data Defines a Role for UBR4 in Virus Budding.
Not available
S-EPMC4829074 | biostudies-literature
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